Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.3■■□□□ 1
Trim42Q9D2H5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim42Q9D2H5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim42Q9D2H5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Trim42Q9D2H5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim42Q9D2H5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim42Q9D2H5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Trim42Q9D2H5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim42Q9D2H5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.29■■□□□ 1
Trim42Q9D2H5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim42Q9D2H5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim42Q9D2H5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim42Q9D2H5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.29■■□□□ 1
Trim42Q9D2H5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim42Q9D2H5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Trim42Q9D2H5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Trim42Q9D2H5 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.28■■□□□ 1
Trim42Q9D2H5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim42Q9D2H5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim42Q9D2H5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim42Q9D2H5 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.28■■□□□ 1
Trim42Q9D2H5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim42Q9D2H5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim42Q9D2H5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.28■■□□□ 1
Trim42Q9D2H5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.27■■□□□ 1
Trim42Q9D2H5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Trim42Q9D2H5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim42Q9D2H5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Trim42Q9D2H5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.27■■□□□ 1
Trim42Q9D2H5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim42Q9D2H5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Trim42Q9D2H5 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.27■□□□□ 0.99
Trim42Q9D2H5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.26■□□□□ 0.99
Trim42Q9D2H5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Trim42Q9D2H5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim42Q9D2H5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim42Q9D2H5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.25■□□□□ 0.99
Trim42Q9D2H5 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim42Q9D2H5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim42Q9D2H5 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim42Q9D2H5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim42Q9D2H5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Trim42Q9D2H5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim42Q9D2H5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.24■□□□□ 0.99
Trim42Q9D2H5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim42Q9D2H5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim42Q9D2H5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim42Q9D2H5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim42Q9D2H5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim42Q9D2H5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim42Q9D2H5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim42Q9D2H5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.23■□□□□ 0.99
Trim42Q9D2H5 Gm9812-201ENSMUST00000061934 968 ntBASIC21.23■□□□□ 0.99
Trim42Q9D2H5 Gm4799-201ENSMUST00000095396 657 ntBASIC21.23■□□□□ 0.99
Trim42Q9D2H5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim42Q9D2H5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim42Q9D2H5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim42Q9D2H5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim42Q9D2H5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim42Q9D2H5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim42Q9D2H5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim42Q9D2H5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.22■□□□□ 0.99
Trim42Q9D2H5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim42Q9D2H5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim42Q9D2H5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim42Q9D2H5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim42Q9D2H5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Trim42Q9D2H5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Trim42Q9D2H5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim42Q9D2H5 Iqck-206ENSMUST00000208658 2891 ntBASIC21.21■□□□□ 0.99
Trim42Q9D2H5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.21■□□□□ 0.99
Trim42Q9D2H5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim42Q9D2H5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim42Q9D2H5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim42Q9D2H5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.2■□□□□ 0.98
Trim42Q9D2H5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim42Q9D2H5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Trim42Q9D2H5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim42Q9D2H5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.2■□□□□ 0.98
Trim42Q9D2H5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim42Q9D2H5 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.19■□□□□ 0.98
Trim42Q9D2H5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Trim42Q9D2H5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim42Q9D2H5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim42Q9D2H5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim42Q9D2H5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim42Q9D2H5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trim42Q9D2H5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim42Q9D2H5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim42Q9D2H5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.18■□□□□ 0.98
Trim42Q9D2H5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim42Q9D2H5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim42Q9D2H5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.18■□□□□ 0.98
Trim42Q9D2H5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim42Q9D2H5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim42Q9D2H5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim42Q9D2H5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim42Q9D2H5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Trim42Q9D2H5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Trim42Q9D2H5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms