Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mrpl55Q9CZ83 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mrpl55Q9CZ83 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mrpl55Q9CZ83 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Mrpl55Q9CZ83 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mrpl55Q9CZ83 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Mrpl55Q9CZ83 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC13.97□□□□□ -0.17
Mrpl55Q9CZ83 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mrpl55Q9CZ83 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC13.97□□□□□ -0.17
Mrpl55Q9CZ83 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mrpl55Q9CZ83 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mrpl55Q9CZ83 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mrpl55Q9CZ83 Gm8093-201ENSMUST00000128935 1892 ntBASIC13.97□□□□□ -0.17
Mrpl55Q9CZ83 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mrpl55Q9CZ83 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mrpl55Q9CZ83 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mrpl55Q9CZ83 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
Mrpl55Q9CZ83 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mrpl55Q9CZ83 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mrpl55Q9CZ83 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC13.96□□□□□ -0.17
Mrpl55Q9CZ83 Il17rd-202ENSMUST00000223942 2186 ntBASIC13.96□□□□□ -0.18
Mrpl55Q9CZ83 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Mrpl55Q9CZ83 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Mrpl55Q9CZ83 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mrpl55Q9CZ83 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mrpl55Q9CZ83 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mrpl55Q9CZ83 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC13.95□□□□□ -0.18
Mrpl55Q9CZ83 Gm9812-201ENSMUST00000061934 968 ntBASIC13.95□□□□□ -0.18
Mrpl55Q9CZ83 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mrpl55Q9CZ83 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mrpl55Q9CZ83 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mrpl55Q9CZ83 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mrpl55Q9CZ83 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mrpl55Q9CZ83 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC13.95□□□□□ -0.18
Mrpl55Q9CZ83 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Mrpl55Q9CZ83 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Mrpl55Q9CZ83 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Mrpl55Q9CZ83 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mrpl55Q9CZ83 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mrpl55Q9CZ83 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mrpl55Q9CZ83 AC122317.2-201ENSMUST00000218708 1248 ntBASIC13.94□□□□□ -0.18
Mrpl55Q9CZ83 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mrpl55Q9CZ83 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC13.94□□□□□ -0.18
Mrpl55Q9CZ83 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mrpl55Q9CZ83 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Mrpl55Q9CZ83 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC13.94□□□□□ -0.18
Mrpl55Q9CZ83 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Mrpl55Q9CZ83 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Mrpl55Q9CZ83 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC13.93□□□□□ -0.18
Mrpl55Q9CZ83 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mrpl55Q9CZ83 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Mrpl55Q9CZ83 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mrpl55Q9CZ83 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Mrpl55Q9CZ83 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mrpl55Q9CZ83 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC13.93□□□□□ -0.18
Mrpl55Q9CZ83 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Mrpl55Q9CZ83 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mrpl55Q9CZ83 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mrpl55Q9CZ83 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mrpl55Q9CZ83 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mrpl55Q9CZ83 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Mrpl55Q9CZ83 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Mrpl55Q9CZ83 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mrpl55Q9CZ83 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mrpl55Q9CZ83 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Mrpl55Q9CZ83 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC13.92□□□□□ -0.18
Mrpl55Q9CZ83 AC153911.1-201ENSMUST00000220378 758 ntBASIC13.92□□□□□ -0.18
Mrpl55Q9CZ83 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Mrpl55Q9CZ83 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Mrpl55Q9CZ83 Gm9910-201ENSMUST00000195385 1550 ntBASIC13.92□□□□□ -0.18
Mrpl55Q9CZ83 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mrpl55Q9CZ83 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mrpl55Q9CZ83 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mrpl55Q9CZ83 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Mrpl55Q9CZ83 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Mrpl55Q9CZ83 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mrpl55Q9CZ83 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Mrpl55Q9CZ83 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Mrpl55Q9CZ83 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC13.91□□□□□ -0.18
Mrpl55Q9CZ83 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mrpl55Q9CZ83 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mrpl55Q9CZ83 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Mrpl55Q9CZ83 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mrpl55Q9CZ83 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC13.91□□□□□ -0.18
Mrpl55Q9CZ83 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Mrpl55Q9CZ83 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Mrpl55Q9CZ83 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mrpl55Q9CZ83 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC13.9□□□□□ -0.18
Mrpl55Q9CZ83 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Mrpl55Q9CZ83 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.9□□□□□ -0.18
Mrpl55Q9CZ83 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC13.9□□□□□ -0.18
Mrpl55Q9CZ83 Gm12366-201ENSMUST00000121722 873 ntBASIC13.9□□□□□ -0.18
Mrpl55Q9CZ83 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC13.9□□□□□ -0.18
Mrpl55Q9CZ83 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mrpl55Q9CZ83 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC13.9□□□□□ -0.18
Mrpl55Q9CZ83 Gm5786-201ENSMUST00000085368 882 ntBASIC13.9□□□□□ -0.18
Mrpl55Q9CZ83 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mrpl55Q9CZ83 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Mrpl55Q9CZ83 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Mrpl55Q9CZ83 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms