Protein–RNA interactions for Protein: Q9CY16

Mrps28, 28S ribosomal protein S28, mitochondrial, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps28Q9CY16 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrps28Q9CY16 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrps28Q9CY16 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrps28Q9CY16 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Mrps28Q9CY16 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mrps28Q9CY16 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mrps28Q9CY16 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Mrps28Q9CY16 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.33■□□□□ 0.68
Mrps28Q9CY16 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mrps28Q9CY16 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.33■□□□□ 0.68
Mrps28Q9CY16 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.33■□□□□ 0.68
Mrps28Q9CY16 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mrps28Q9CY16 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mrps28Q9CY16 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mrps28Q9CY16 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrps28Q9CY16 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrps28Q9CY16 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Mrps28Q9CY16 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.32■□□□□ 0.68
Mrps28Q9CY16 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrps28Q9CY16 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrps28Q9CY16 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mrps28Q9CY16 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Mrps28Q9CY16 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mrps28Q9CY16 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mrps28Q9CY16 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mrps28Q9CY16 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrps28Q9CY16 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Mrps28Q9CY16 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrps28Q9CY16 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrps28Q9CY16 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrps28Q9CY16 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mrps28Q9CY16 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrps28Q9CY16 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Mrps28Q9CY16 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrps28Q9CY16 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Mrps28Q9CY16 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Mrps28Q9CY16 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mrps28Q9CY16 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.28■□□□□ 0.68
Mrps28Q9CY16 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Mrps28Q9CY16 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mrps28Q9CY16 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.28■□□□□ 0.68
Mrps28Q9CY16 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Mrps28Q9CY16 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mrps28Q9CY16 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mrps28Q9CY16 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.27■□□□□ 0.68
Mrps28Q9CY16 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mrps28Q9CY16 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mrps28Q9CY16 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mrps28Q9CY16 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Mrps28Q9CY16 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mrps28Q9CY16 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mrps28Q9CY16 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mrps28Q9CY16 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mrps28Q9CY16 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Mrps28Q9CY16 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrps28Q9CY16 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mrps28Q9CY16 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrps28Q9CY16 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrps28Q9CY16 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Mrps28Q9CY16 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Mrps28Q9CY16 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrps28Q9CY16 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.25■□□□□ 0.67
Mrps28Q9CY16 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrps28Q9CY16 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrps28Q9CY16 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mrps28Q9CY16 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Mrps28Q9CY16 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mrps28Q9CY16 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mrps28Q9CY16 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mrps28Q9CY16 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Mrps28Q9CY16 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mrps28Q9CY16 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mrps28Q9CY16 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mrps28Q9CY16 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.23■□□□□ 0.67
Mrps28Q9CY16 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mrps28Q9CY16 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.23■□□□□ 0.67
Mrps28Q9CY16 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mrps28Q9CY16 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mrps28Q9CY16 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mrps28Q9CY16 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mrps28Q9CY16 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mrps28Q9CY16 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.22■□□□□ 0.67
Mrps28Q9CY16 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Mrps28Q9CY16 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mrps28Q9CY16 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.22■□□□□ 0.67
Mrps28Q9CY16 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mrps28Q9CY16 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mrps28Q9CY16 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.22■□□□□ 0.67
Mrps28Q9CY16 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mrps28Q9CY16 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Mrps28Q9CY16 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mrps28Q9CY16 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mrps28Q9CY16 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Mrps28Q9CY16 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mrps28Q9CY16 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mrps28Q9CY16 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mrps28Q9CY16 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Mrps28Q9CY16 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mrps28Q9CY16 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mrps28Q9CY16 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms