Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC11.48□□□□□ -0.57
Sec61bQ9CQS8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC11.48□□□□□ -0.57
Sec61bQ9CQS8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61bQ9CQS8 Gm13241-201ENSMUST00000094493 780 ntBASIC11.48□□□□□ -0.57
Sec61bQ9CQS8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61bQ9CQS8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61bQ9CQS8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61bQ9CQS8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sec61bQ9CQS8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC11.47□□□□□ -0.57
Sec61bQ9CQS8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sec61bQ9CQS8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61bQ9CQS8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61bQ9CQS8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Sec61bQ9CQS8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61bQ9CQS8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC11.47□□□□□ -0.57
Sec61bQ9CQS8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sec61bQ9CQS8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC11.47□□□□□ -0.57
Sec61bQ9CQS8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC11.47□□□□□ -0.57
Sec61bQ9CQS8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC11.47□□□□□ -0.57
Sec61bQ9CQS8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sec61bQ9CQS8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61bQ9CQS8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61bQ9CQS8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61bQ9CQS8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61bQ9CQS8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61bQ9CQS8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC11.46□□□□□ -0.57
Sec61bQ9CQS8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61bQ9CQS8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC11.46□□□□□ -0.57
Sec61bQ9CQS8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61bQ9CQS8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sec61bQ9CQS8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sec61bQ9CQS8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Sec61bQ9CQS8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61bQ9CQS8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sec61bQ9CQS8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sec61bQ9CQS8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61bQ9CQS8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Sec61bQ9CQS8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61bQ9CQS8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC11.44□□□□□ -0.58
Sec61bQ9CQS8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Sec61bQ9CQS8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61bQ9CQS8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sec61bQ9CQS8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC11.44□□□□□ -0.58
Sec61bQ9CQS8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61bQ9CQS8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Sec61bQ9CQS8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC11.43□□□□□ -0.58
Sec61bQ9CQS8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61bQ9CQS8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sec61bQ9CQS8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sec61bQ9CQS8 Gm9847-201ENSMUST00000052528 599 ntBASIC11.43□□□□□ -0.58
Sec61bQ9CQS8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sec61bQ9CQS8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC11.43□□□□□ -0.58
Sec61bQ9CQS8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61bQ9CQS8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61bQ9CQS8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61bQ9CQS8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC11.42□□□□□ -0.58
Sec61bQ9CQS8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61bQ9CQS8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sec61bQ9CQS8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61bQ9CQS8 Gm42699-201ENSMUST00000198104 1657 ntBASIC11.42□□□□□ -0.58
Sec61bQ9CQS8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61bQ9CQS8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61bQ9CQS8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61bQ9CQS8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sec61bQ9CQS8 Gm43034-201ENSMUST00000198678 1364 ntBASIC11.41□□□□□ -0.58
Sec61bQ9CQS8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61bQ9CQS8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61bQ9CQS8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61bQ9CQS8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61bQ9CQS8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61bQ9CQS8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Sec61bQ9CQS8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61bQ9CQS8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61bQ9CQS8 Gm22238-201ENSMUST00000175222 88 ntBASIC11.41□□□□□ -0.58
Sec61bQ9CQS8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC11.41□□□□□ -0.58
Sec61bQ9CQS8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC11.41□□□□□ -0.58
Sec61bQ9CQS8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61bQ9CQS8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61bQ9CQS8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61bQ9CQS8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sec61bQ9CQS8 Gm28731-201ENSMUST00000185564 1569 ntBASIC11.41□□□□□ -0.58
Sec61bQ9CQS8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms