Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.16■□□□□ 0.82
Nkd1Q99MH6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Nkd1Q99MH6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkd1Q99MH6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.16■□□□□ 0.82
Nkd1Q99MH6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Nkd1Q99MH6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Nkd1Q99MH6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.15■□□□□ 0.82
Nkd1Q99MH6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkd1Q99MH6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkd1Q99MH6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Nkd1Q99MH6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nkd1Q99MH6 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.14■□□□□ 0.81
Nkd1Q99MH6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.14■□□□□ 0.81
Nkd1Q99MH6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nkd1Q99MH6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.14■□□□□ 0.81
Nkd1Q99MH6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nkd1Q99MH6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nkd1Q99MH6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Nkd1Q99MH6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkd1Q99MH6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkd1Q99MH6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.13■□□□□ 0.81
Nkd1Q99MH6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkd1Q99MH6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkd1Q99MH6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.13■□□□□ 0.81
Nkd1Q99MH6 Scarna2-201ENSMUST00000157560 414 ntBASIC20.13■□□□□ 0.81
Nkd1Q99MH6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nkd1Q99MH6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nkd1Q99MH6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkd1Q99MH6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkd1Q99MH6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkd1Q99MH6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nkd1Q99MH6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkd1Q99MH6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkd1Q99MH6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nkd1Q99MH6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Nkd1Q99MH6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nkd1Q99MH6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Nkd1Q99MH6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkd1Q99MH6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.11■□□□□ 0.81
Nkd1Q99MH6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nkd1Q99MH6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.11■□□□□ 0.81
Nkd1Q99MH6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.11■□□□□ 0.81
Nkd1Q99MH6 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.11■□□□□ 0.81
Nkd1Q99MH6 Gm16437-201ENSMUST00000025669 507 ntBASIC20.11■□□□□ 0.81
Nkd1Q99MH6 Gm9806-201ENSMUST00000051080 552 ntBASIC20.11■□□□□ 0.81
Nkd1Q99MH6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkd1Q99MH6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkd1Q99MH6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkd1Q99MH6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nkd1Q99MH6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Nkd1Q99MH6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Nkd1Q99MH6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nkd1Q99MH6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.1■□□□□ 0.81
Nkd1Q99MH6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nkd1Q99MH6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nkd1Q99MH6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nkd1Q99MH6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Nkd1Q99MH6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nkd1Q99MH6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nkd1Q99MH6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkd1Q99MH6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Nkd1Q99MH6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.09■□□□□ 0.81
Nkd1Q99MH6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkd1Q99MH6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkd1Q99MH6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Nkd1Q99MH6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Nkd1Q99MH6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Nkd1Q99MH6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nkd1Q99MH6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.08■□□□□ 0.81
Nkd1Q99MH6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Nkd1Q99MH6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.08■□□□□ 0.81
Nkd1Q99MH6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nkd1Q99MH6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nkd1Q99MH6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nkd1Q99MH6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nkd1Q99MH6 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.07■□□□□ 0.8
Nkd1Q99MH6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkd1Q99MH6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkd1Q99MH6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkd1Q99MH6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nkd1Q99MH6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkd1Q99MH6 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.06■□□□□ 0.8
Nkd1Q99MH6 Gm11687-201ENSMUST00000118911 886 ntBASIC20.06■□□□□ 0.8
Nkd1Q99MH6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkd1Q99MH6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkd1Q99MH6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkd1Q99MH6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nkd1Q99MH6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Nkd1Q99MH6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.05■□□□□ 0.8
Nkd1Q99MH6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkd1Q99MH6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkd1Q99MH6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkd1Q99MH6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
Nkd1Q99MH6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkd1Q99MH6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkd1Q99MH6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.04■□□□□ 0.8
Nkd1Q99MH6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.04■□□□□ 0.8
Nkd1Q99MH6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkd1Q99MH6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nkd1Q99MH6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms