Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.47■■□□□ 1.03
Cstf1Q99LC2 Golgb1-201ENSMUST00000023534 498 ntBASIC21.47■■□□□ 1.03
Cstf1Q99LC2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cstf1Q99LC2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cstf1Q99LC2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cstf1Q99LC2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cstf1Q99LC2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cstf1Q99LC2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cstf1Q99LC2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.46■■□□□ 1.03
Cstf1Q99LC2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cstf1Q99LC2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cstf1Q99LC2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cstf1Q99LC2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Cstf1Q99LC2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cstf1Q99LC2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cstf1Q99LC2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cstf1Q99LC2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Cstf1Q99LC2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Cstf1Q99LC2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cstf1Q99LC2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cstf1Q99LC2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.44■■□□□ 1.02
Cstf1Q99LC2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.44■■□□□ 1.02
Cstf1Q99LC2 Gm8495-201ENSMUST00000188740 694 ntBASIC21.44■■□□□ 1.02
Cstf1Q99LC2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cstf1Q99LC2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.44■■□□□ 1.02
Cstf1Q99LC2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Cstf1Q99LC2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cstf1Q99LC2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.43■■□□□ 1.02
Cstf1Q99LC2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.43■■□□□ 1.02
Cstf1Q99LC2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Cstf1Q99LC2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.43■■□□□ 1.02
Cstf1Q99LC2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.43■■□□□ 1.02
Cstf1Q99LC2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cstf1Q99LC2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cstf1Q99LC2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
Cstf1Q99LC2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cstf1Q99LC2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cstf1Q99LC2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cstf1Q99LC2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cstf1Q99LC2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cstf1Q99LC2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.41■■□□□ 1.02
Cstf1Q99LC2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cstf1Q99LC2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Cstf1Q99LC2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.41■■□□□ 1.02
Cstf1Q99LC2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.41■■□□□ 1.02
Cstf1Q99LC2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cstf1Q99LC2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cstf1Q99LC2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cstf1Q99LC2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cstf1Q99LC2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Cstf1Q99LC2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Cstf1Q99LC2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cstf1Q99LC2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cstf1Q99LC2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cstf1Q99LC2 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.39■■□□□ 1.02
Cstf1Q99LC2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cstf1Q99LC2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cstf1Q99LC2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cstf1Q99LC2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cstf1Q99LC2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cstf1Q99LC2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cstf1Q99LC2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.38■■□□□ 1.01
Cstf1Q99LC2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Cstf1Q99LC2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cstf1Q99LC2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cstf1Q99LC2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cstf1Q99LC2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cstf1Q99LC2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cstf1Q99LC2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cstf1Q99LC2 Gm18284-201ENSMUST00000172604 624 ntBASIC21.37■■□□□ 1.01
Cstf1Q99LC2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cstf1Q99LC2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.37■■□□□ 1.01
Cstf1Q99LC2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cstf1Q99LC2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Cstf1Q99LC2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cstf1Q99LC2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cstf1Q99LC2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.36■■□□□ 1.01
Cstf1Q99LC2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cstf1Q99LC2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cstf1Q99LC2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cstf1Q99LC2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cstf1Q99LC2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cstf1Q99LC2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Cstf1Q99LC2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cstf1Q99LC2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cstf1Q99LC2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Cstf1Q99LC2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Cstf1Q99LC2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cstf1Q99LC2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.35■■□□□ 1.01
Cstf1Q99LC2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cstf1Q99LC2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.35■■□□□ 1.01
Cstf1Q99LC2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.35■■□□□ 1.01
Cstf1Q99LC2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cstf1Q99LC2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cstf1Q99LC2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cstf1Q99LC2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cstf1Q99LC2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cstf1Q99LC2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cstf1Q99LC2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.34■■□□□ 1.01
Cstf1Q99LC2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms