Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Prdm9Q96EQ9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.21■□□□□ 0.99
Prdm9Q96EQ9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.21■□□□□ 0.99
Prdm9Q96EQ9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Prdm9Q96EQ9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Prdm9Q96EQ9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prdm9Q96EQ9 Gm9959-201ENSMUST00000068277 390 ntBASIC21.2■□□□□ 0.98
Prdm9Q96EQ9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prdm9Q96EQ9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Prdm9Q96EQ9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prdm9Q96EQ9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prdm9Q96EQ9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prdm9Q96EQ9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prdm9Q96EQ9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prdm9Q96EQ9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Prdm9Q96EQ9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.18■□□□□ 0.98
Prdm9Q96EQ9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Prdm9Q96EQ9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prdm9Q96EQ9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Prdm9Q96EQ9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Prdm9Q96EQ9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.17■□□□□ 0.98
Prdm9Q96EQ9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.17■□□□□ 0.98
Prdm9Q96EQ9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prdm9Q96EQ9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prdm9Q96EQ9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Prdm9Q96EQ9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Prdm9Q96EQ9 Gm14117-201ENSMUST00000122417 843 ntBASIC21.16■□□□□ 0.98
Prdm9Q96EQ9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.16■□□□□ 0.98
Prdm9Q96EQ9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.16■□□□□ 0.98
Prdm9Q96EQ9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prdm9Q96EQ9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prdm9Q96EQ9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Prdm9Q96EQ9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prdm9Q96EQ9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.15■□□□□ 0.98
Prdm9Q96EQ9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prdm9Q96EQ9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prdm9Q96EQ9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Prdm9Q96EQ9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prdm9Q96EQ9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.15■□□□□ 0.98
Prdm9Q96EQ9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Prdm9Q96EQ9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prdm9Q96EQ9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Prdm9Q96EQ9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Prdm9Q96EQ9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Prdm9Q96EQ9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Prdm9Q96EQ9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prdm9Q96EQ9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prdm9Q96EQ9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.14■□□□□ 0.98
Prdm9Q96EQ9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prdm9Q96EQ9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prdm9Q96EQ9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prdm9Q96EQ9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Prdm9Q96EQ9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Prdm9Q96EQ9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prdm9Q96EQ9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.14■□□□□ 0.97
Prdm9Q96EQ9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Prdm9Q96EQ9 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.13■□□□□ 0.97
Prdm9Q96EQ9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.13■□□□□ 0.97
Prdm9Q96EQ9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Prdm9Q96EQ9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Prdm9Q96EQ9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prdm9Q96EQ9 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.12■□□□□ 0.97
Prdm9Q96EQ9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prdm9Q96EQ9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prdm9Q96EQ9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prdm9Q96EQ9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Prdm9Q96EQ9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Prdm9Q96EQ9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.11■□□□□ 0.97
Prdm9Q96EQ9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prdm9Q96EQ9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prdm9Q96EQ9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Prdm9Q96EQ9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prdm9Q96EQ9 Etf1-202ENSMUST00000180351 108 ntBASIC21.11■□□□□ 0.97
Prdm9Q96EQ9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.11■□□□□ 0.97
Prdm9Q96EQ9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Prdm9Q96EQ9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prdm9Q96EQ9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prdm9Q96EQ9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Prdm9Q96EQ9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Prdm9Q96EQ9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.1■□□□□ 0.97
Prdm9Q96EQ9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Prdm9Q96EQ9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Prdm9Q96EQ9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Prdm9Q96EQ9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prdm9Q96EQ9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.09■□□□□ 0.97
Prdm9Q96EQ9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.09■□□□□ 0.97
Prdm9Q96EQ9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prdm9Q96EQ9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.08■□□□□ 0.97
Prdm9Q96EQ9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prdm9Q96EQ9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.08■□□□□ 0.97
Prdm9Q96EQ9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Prdm9Q96EQ9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.08■□□□□ 0.97
Prdm9Q96EQ9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prdm9Q96EQ9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Prdm9Q96EQ9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prdm9Q96EQ9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prdm9Q96EQ9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Prdm9Q96EQ9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prdm9Q96EQ9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Prdm9Q96EQ9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms