Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha8Q91Y12 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.83■□□□□ 0.93
Pcdha8Q91Y12 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdha8Q91Y12 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.83■□□□□ 0.92
Pcdha8Q91Y12 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdha8Q91Y12 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdha8Q91Y12 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdha8Q91Y12 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Pcdha8Q91Y12 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha8Q91Y12 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha8Q91Y12 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha8Q91Y12 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcdha8Q91Y12 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdha8Q91Y12 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha8Q91Y12 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha8Q91Y12 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha8Q91Y12 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdha8Q91Y12 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Pcdha8Q91Y12 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha8Q91Y12 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha8Q91Y12 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha8Q91Y12 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdha8Q91Y12 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
Pcdha8Q91Y12 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha8Q91Y12 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha8Q91Y12 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha8Q91Y12 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Pcdha8Q91Y12 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdha8Q91Y12 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha8Q91Y12 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha8Q91Y12 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha8Q91Y12 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha8Q91Y12 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcdha8Q91Y12 Gm10420-201ENSMUST00000121713 882 ntBASIC20.78■□□□□ 0.92
Pcdha8Q91Y12 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.78■□□□□ 0.92
Pcdha8Q91Y12 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha8Q91Y12 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha8Q91Y12 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha8Q91Y12 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha8Q91Y12 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha8Q91Y12 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha8Q91Y12 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha8Q91Y12 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha8Q91Y12 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdha8Q91Y12 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha8Q91Y12 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha8Q91Y12 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha8Q91Y12 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Pcdha8Q91Y12 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Pcdha8Q91Y12 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha8Q91Y12 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha8Q91Y12 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdha8Q91Y12 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdha8Q91Y12 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha8Q91Y12 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdha8Q91Y12 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha8Q91Y12 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha8Q91Y12 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Pcdha8Q91Y12 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdha8Q91Y12 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha8Q91Y12 Cap2-205ENSMUST00000225824 1634 ntBASIC20.75■□□□□ 0.91
Pcdha8Q91Y12 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Pcdha8Q91Y12 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Pcdha8Q91Y12 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdha8Q91Y12 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha8Q91Y12 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdha8Q91Y12 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha8Q91Y12 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha8Q91Y12 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pcdha8Q91Y12 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdha8Q91Y12 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha8Q91Y12 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha8Q91Y12 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdha8Q91Y12 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Pcdha8Q91Y12 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha8Q91Y12 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Pcdha8Q91Y12 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha8Q91Y12 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha8Q91Y12 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha8Q91Y12 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.72■□□□□ 0.91
Pcdha8Q91Y12 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha8Q91Y12 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdha8Q91Y12 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.71■□□□□ 0.91
Pcdha8Q91Y12 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha8Q91Y12 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha8Q91Y12 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha8Q91Y12 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdha8Q91Y12 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Pcdha8Q91Y12 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Pcdha8Q91Y12 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha8Q91Y12 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha8Q91Y12 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha8Q91Y12 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pcdha8Q91Y12 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Pcdha8Q91Y12 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha8Q91Y12 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha8Q91Y12 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdha8Q91Y12 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Pcdha8Q91Y12 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdha8Q91Y12 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms