Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdhb18Q91Y02 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.44■■□□□ 1.18
Pcdhb18Q91Y02 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb18Q91Y02 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb18Q91Y02 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Pcdhb18Q91Y02 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb18Q91Y02 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdhb18Q91Y02 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
Pcdhb18Q91Y02 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb18Q91Y02 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb18Q91Y02 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb18Q91Y02 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb18Q91Y02 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb18Q91Y02 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb18Q91Y02 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb18Q91Y02 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb18Q91Y02 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb18Q91Y02 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb18Q91Y02 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdhb18Q91Y02 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb18Q91Y02 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb18Q91Y02 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb18Q91Y02 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.42■■□□□ 1.18
Pcdhb18Q91Y02 Gm40881-201ENSMUST00000223397 166 ntBASIC22.42■■□□□ 1.18
Pcdhb18Q91Y02 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Pcdhb18Q91Y02 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb18Q91Y02 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Pcdhb18Q91Y02 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb18Q91Y02 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.41■■□□□ 1.18
Pcdhb18Q91Y02 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.41■■□□□ 1.18
Pcdhb18Q91Y02 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb18Q91Y02 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.41■■□□□ 1.18
Pcdhb18Q91Y02 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Pcdhb18Q91Y02 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.4■■□□□ 1.18
Pcdhb18Q91Y02 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.4■■□□□ 1.18
Pcdhb18Q91Y02 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Pcdhb18Q91Y02 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.4■■□□□ 1.18
Pcdhb18Q91Y02 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb18Q91Y02 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.4■■□□□ 1.18
Pcdhb18Q91Y02 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Pcdhb18Q91Y02 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
Pcdhb18Q91Y02 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb18Q91Y02 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhb18Q91Y02 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Pcdhb18Q91Y02 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.39■■□□□ 1.18
Pcdhb18Q91Y02 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.39■■□□□ 1.18
Pcdhb18Q91Y02 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.39■■□□□ 1.17
Pcdhb18Q91Y02 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.39■■□□□ 1.17
Pcdhb18Q91Y02 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb18Q91Y02 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb18Q91Y02 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb18Q91Y02 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb18Q91Y02 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Pcdhb18Q91Y02 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb18Q91Y02 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb18Q91Y02 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb18Q91Y02 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb18Q91Y02 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb18Q91Y02 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb18Q91Y02 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.37■■□□□ 1.17
Pcdhb18Q91Y02 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.37■■□□□ 1.17
Pcdhb18Q91Y02 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb18Q91Y02 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb18Q91Y02 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb18Q91Y02 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb18Q91Y02 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb18Q91Y02 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb18Q91Y02 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb18Q91Y02 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb18Q91Y02 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb18Q91Y02 Gm22238-201ENSMUST00000175222 88 ntBASIC22.36■■□□□ 1.17
Pcdhb18Q91Y02 Gm13241-201ENSMUST00000094493 780 ntBASIC22.36■■□□□ 1.17
Pcdhb18Q91Y02 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Pcdhb18Q91Y02 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb18Q91Y02 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb18Q91Y02 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb18Q91Y02 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb18Q91Y02 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.35■■□□□ 1.17
Pcdhb18Q91Y02 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.35■■□□□ 1.17
Pcdhb18Q91Y02 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb18Q91Y02 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.34■■□□□ 1.17
Pcdhb18Q91Y02 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb18Q91Y02 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.34■■□□□ 1.17
Pcdhb18Q91Y02 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb18Q91Y02 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb18Q91Y02 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb18Q91Y02 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.33■■□□□ 1.17
Pcdhb18Q91Y02 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.33■■□□□ 1.17
Pcdhb18Q91Y02 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb18Q91Y02 Gm9847-201ENSMUST00000052528 599 ntBASIC22.33■■□□□ 1.17
Pcdhb18Q91Y02 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdhb18Q91Y02 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb18Q91Y02 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb18Q91Y02 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb18Q91Y02 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.32■■□□□ 1.16
Pcdhb18Q91Y02 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb18Q91Y02 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb18Q91Y02 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb18Q91Y02 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb18Q91Y02 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms