Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhb20Q91XZ9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb20Q91XZ9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdhb20Q91XZ9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.58■□□□□ 0.89
Pcdhb20Q91XZ9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb20Q91XZ9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb20Q91XZ9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb20Q91XZ9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.57■□□□□ 0.88
Pcdhb20Q91XZ9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb20Q91XZ9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb20Q91XZ9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb20Q91XZ9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb20Q91XZ9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb20Q91XZ9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb20Q91XZ9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb20Q91XZ9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb20Q91XZ9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pcdhb20Q91XZ9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb20Q91XZ9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb20Q91XZ9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb20Q91XZ9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb20Q91XZ9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb20Q91XZ9 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.55■□□□□ 0.88
Pcdhb20Q91XZ9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb20Q91XZ9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhb20Q91XZ9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb20Q91XZ9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb20Q91XZ9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb20Q91XZ9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb20Q91XZ9 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.54■□□□□ 0.88
Pcdhb20Q91XZ9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdhb20Q91XZ9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb20Q91XZ9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb20Q91XZ9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb20Q91XZ9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Pcdhb20Q91XZ9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb20Q91XZ9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb20Q91XZ9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb20Q91XZ9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.52■□□□□ 0.88
Pcdhb20Q91XZ9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb20Q91XZ9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.52■□□□□ 0.88
Pcdhb20Q91XZ9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb20Q91XZ9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb20Q91XZ9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb20Q91XZ9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb20Q91XZ9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb20Q91XZ9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb20Q91XZ9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb20Q91XZ9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.51■□□□□ 0.87
Pcdhb20Q91XZ9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb20Q91XZ9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcdhb20Q91XZ9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhb20Q91XZ9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhb20Q91XZ9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb20Q91XZ9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhb20Q91XZ9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb20Q91XZ9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb20Q91XZ9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb20Q91XZ9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb20Q91XZ9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb20Q91XZ9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb20Q91XZ9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb20Q91XZ9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdhb20Q91XZ9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb20Q91XZ9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb20Q91XZ9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhb20Q91XZ9 Rps24-207ENSMUST00000224568 714 ntBASIC20.49■□□□□ 0.87
Pcdhb20Q91XZ9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhb20Q91XZ9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb20Q91XZ9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb20Q91XZ9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb20Q91XZ9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb20Q91XZ9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb20Q91XZ9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.47■□□□□ 0.87
Pcdhb20Q91XZ9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb20Q91XZ9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb20Q91XZ9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pcdhb20Q91XZ9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb20Q91XZ9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb20Q91XZ9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb20Q91XZ9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb20Q91XZ9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb20Q91XZ9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb20Q91XZ9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb20Q91XZ9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb20Q91XZ9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb20Q91XZ9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.45■□□□□ 0.86
Pcdhb20Q91XZ9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdhb20Q91XZ9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb20Q91XZ9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdhb20Q91XZ9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb20Q91XZ9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdhb20Q91XZ9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb20Q91XZ9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdhb20Q91XZ9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb20Q91XZ9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pcdhb20Q91XZ9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb20Q91XZ9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb20Q91XZ9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.44■□□□□ 0.86
Pcdhb20Q91XZ9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms