Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdhr1Q8VHP6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdhr1Q8VHP6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.94■□□□□ 0.94
Cdhr1Q8VHP6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdhr1Q8VHP6 Gm15039-201ENSMUST00000118914 875 ntBASIC20.94■□□□□ 0.94
Cdhr1Q8VHP6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.94■□□□□ 0.94
Cdhr1Q8VHP6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.94■□□□□ 0.94
Cdhr1Q8VHP6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cdhr1Q8VHP6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdhr1Q8VHP6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdhr1Q8VHP6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.94■□□□□ 0.94
Cdhr1Q8VHP6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.94■□□□□ 0.94
Cdhr1Q8VHP6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.93■□□□□ 0.94
Cdhr1Q8VHP6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Cdhr1Q8VHP6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdhr1Q8VHP6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.93■□□□□ 0.94
Cdhr1Q8VHP6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdhr1Q8VHP6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.92■□□□□ 0.94
Cdhr1Q8VHP6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdhr1Q8VHP6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdhr1Q8VHP6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.92■□□□□ 0.94
Cdhr1Q8VHP6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdhr1Q8VHP6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cdhr1Q8VHP6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdhr1Q8VHP6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cdhr1Q8VHP6 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.91■□□□□ 0.94
Cdhr1Q8VHP6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cdhr1Q8VHP6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.91■□□□□ 0.94
Cdhr1Q8VHP6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cdhr1Q8VHP6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Gm40881-201ENSMUST00000223397 166 ntBASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdhr1Q8VHP6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cdhr1Q8VHP6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdhr1Q8VHP6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.89■□□□□ 0.93
Cdhr1Q8VHP6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.89■□□□□ 0.93
Cdhr1Q8VHP6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Cdhr1Q8VHP6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdhr1Q8VHP6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdhr1Q8VHP6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdhr1Q8VHP6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.88■□□□□ 0.93
Cdhr1Q8VHP6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cdhr1Q8VHP6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.88■□□□□ 0.93
Cdhr1Q8VHP6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.88■□□□□ 0.93
Cdhr1Q8VHP6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.88■□□□□ 0.93
Cdhr1Q8VHP6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdhr1Q8VHP6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdhr1Q8VHP6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdhr1Q8VHP6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdhr1Q8VHP6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdhr1Q8VHP6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdhr1Q8VHP6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdhr1Q8VHP6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cdhr1Q8VHP6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdhr1Q8VHP6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cdhr1Q8VHP6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cdhr1Q8VHP6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
Cdhr1Q8VHP6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cdhr1Q8VHP6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdhr1Q8VHP6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdhr1Q8VHP6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.86■□□□□ 0.93
Cdhr1Q8VHP6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cdhr1Q8VHP6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdhr1Q8VHP6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdhr1Q8VHP6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdhr1Q8VHP6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.85■□□□□ 0.93
Cdhr1Q8VHP6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cdhr1Q8VHP6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdhr1Q8VHP6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdhr1Q8VHP6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdhr1Q8VHP6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdhr1Q8VHP6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Cdhr1Q8VHP6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdhr1Q8VHP6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdhr1Q8VHP6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdhr1Q8VHP6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdhr1Q8VHP6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdhr1Q8VHP6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdhr1Q8VHP6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdhr1Q8VHP6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cdhr1Q8VHP6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.83■□□□□ 0.93
Cdhr1Q8VHP6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Cdhr1Q8VHP6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.83■□□□□ 0.93
Cdhr1Q8VHP6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms