Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rnf8Q8VC56 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf8Q8VC56 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf8Q8VC56 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf8Q8VC56 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.53■□□□□ 0.88
Rnf8Q8VC56 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf8Q8VC56 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.53■□□□□ 0.88
Rnf8Q8VC56 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rnf8Q8VC56 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf8Q8VC56 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf8Q8VC56 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf8Q8VC56 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf8Q8VC56 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf8Q8VC56 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rnf8Q8VC56 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf8Q8VC56 Gm14523-201ENSMUST00000117260 558 ntBASIC20.52■□□□□ 0.88
Rnf8Q8VC56 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf8Q8VC56 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf8Q8VC56 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf8Q8VC56 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Rnf8Q8VC56 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf8Q8VC56 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf8Q8VC56 Gm27502-201ENSMUST00000183495 199 ntBASIC20.51■□□□□ 0.87
Rnf8Q8VC56 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.51■□□□□ 0.87
Rnf8Q8VC56 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf8Q8VC56 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf8Q8VC56 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf8Q8VC56 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf8Q8VC56 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rnf8Q8VC56 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Rnf8Q8VC56 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf8Q8VC56 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf8Q8VC56 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf8Q8VC56 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.5■□□□□ 0.87
Rnf8Q8VC56 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf8Q8VC56 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf8Q8VC56 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rnf8Q8VC56 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rnf8Q8VC56 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.49■□□□□ 0.87
Rnf8Q8VC56 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf8Q8VC56 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.49■□□□□ 0.87
Rnf8Q8VC56 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.49■□□□□ 0.87
Rnf8Q8VC56 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rnf8Q8VC56 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Rnf8Q8VC56 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.48■□□□□ 0.87
Rnf8Q8VC56 Gm7332-201ENSMUST00000118351 454 ntBASIC20.48■□□□□ 0.87
Rnf8Q8VC56 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.48■□□□□ 0.87
Rnf8Q8VC56 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf8Q8VC56 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Rnf8Q8VC56 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf8Q8VC56 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf8Q8VC56 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf8Q8VC56 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rnf8Q8VC56 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf8Q8VC56 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf8Q8VC56 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf8Q8VC56 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rnf8Q8VC56 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rnf8Q8VC56 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rnf8Q8VC56 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rnf8Q8VC56 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf8Q8VC56 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Rnf8Q8VC56 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf8Q8VC56 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf8Q8VC56 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rnf8Q8VC56 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rnf8Q8VC56 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf8Q8VC56 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf8Q8VC56 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf8Q8VC56 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Rnf8Q8VC56 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rnf8Q8VC56 Notumos-201ENSMUST00000151998 2659 ntBASIC20.44■□□□□ 0.86
Rnf8Q8VC56 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.43■□□□□ 0.86
Rnf8Q8VC56 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf8Q8VC56 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rnf8Q8VC56 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf8Q8VC56 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf8Q8VC56 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.43■□□□□ 0.86
Rnf8Q8VC56 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.43■□□□□ 0.86
Rnf8Q8VC56 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.43■□□□□ 0.86
Rnf8Q8VC56 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rnf8Q8VC56 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.42■□□□□ 0.86
Rnf8Q8VC56 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf8Q8VC56 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Rnf8Q8VC56 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
Rnf8Q8VC56 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.42■□□□□ 0.86
Rnf8Q8VC56 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf8Q8VC56 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf8Q8VC56 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rnf8Q8VC56 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf8Q8VC56 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf8Q8VC56 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf8Q8VC56 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf8Q8VC56 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf8Q8VC56 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf8Q8VC56 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rnf8Q8VC56 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Rnf8Q8VC56 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Rnf8Q8VC56 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rnf8Q8VC56 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms