Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps39Q8R5L3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps39Q8R5L3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps39Q8R5L3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps39Q8R5L3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps39Q8R5L3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps39Q8R5L3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vps39Q8R5L3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps39Q8R5L3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Vps39Q8R5L3 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.45■■□□□ 1.03
Vps39Q8R5L3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps39Q8R5L3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Vps39Q8R5L3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
Vps39Q8R5L3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vps39Q8R5L3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vps39Q8R5L3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.44■■□□□ 1.02
Vps39Q8R5L3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Vps39Q8R5L3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vps39Q8R5L3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Vps39Q8R5L3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vps39Q8R5L3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.43■■□□□ 1.02
Vps39Q8R5L3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.43■■□□□ 1.02
Vps39Q8R5L3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Vps39Q8R5L3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Vps39Q8R5L3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vps39Q8R5L3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vps39Q8R5L3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.42■■□□□ 1.02
Vps39Q8R5L3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Vps39Q8R5L3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Vps39Q8R5L3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Vps39Q8R5L3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Vps39Q8R5L3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Vps39Q8R5L3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps39Q8R5L3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps39Q8R5L3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Vps39Q8R5L3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Vps39Q8R5L3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Vps39Q8R5L3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps39Q8R5L3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps39Q8R5L3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps39Q8R5L3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps39Q8R5L3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps39Q8R5L3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Vps39Q8R5L3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.4■■□□□ 1.02
Vps39Q8R5L3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps39Q8R5L3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Vps39Q8R5L3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Vps39Q8R5L3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Vps39Q8R5L3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps39Q8R5L3 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.39■■□□□ 1.02
Vps39Q8R5L3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vps39Q8R5L3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vps39Q8R5L3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.39■■□□□ 1.02
Vps39Q8R5L3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vps39Q8R5L3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vps39Q8R5L3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vps39Q8R5L3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps39Q8R5L3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps39Q8R5L3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps39Q8R5L3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps39Q8R5L3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Vps39Q8R5L3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps39Q8R5L3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Vps39Q8R5L3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Vps39Q8R5L3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps39Q8R5L3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps39Q8R5L3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
Vps39Q8R5L3 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.37■■□□□ 1.01
Vps39Q8R5L3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vps39Q8R5L3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps39Q8R5L3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vps39Q8R5L3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vps39Q8R5L3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps39Q8R5L3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps39Q8R5L3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Vps39Q8R5L3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps39Q8R5L3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
Vps39Q8R5L3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps39Q8R5L3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.36■■□□□ 1.01
Vps39Q8R5L3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps39Q8R5L3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps39Q8R5L3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps39Q8R5L3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Vps39Q8R5L3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.35■■□□□ 1.01
Vps39Q8R5L3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps39Q8R5L3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.35■■□□□ 1.01
Vps39Q8R5L3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps39Q8R5L3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Vps39Q8R5L3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps39Q8R5L3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps39Q8R5L3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps39Q8R5L3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps39Q8R5L3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps39Q8R5L3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps39Q8R5L3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps39Q8R5L3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Vps39Q8R5L3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps39Q8R5L3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vps39Q8R5L3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.33■■□□□ 1.01
Vps39Q8R5L3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms