Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Nudcd3Q8R1N4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nudcd3Q8R1N4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Nudcd3Q8R1N4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nudcd3Q8R1N4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nudcd3Q8R1N4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nudcd3Q8R1N4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Nudcd3Q8R1N4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Nudcd3Q8R1N4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nudcd3Q8R1N4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Nudcd3Q8R1N4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Nudcd3Q8R1N4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nudcd3Q8R1N4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nudcd3Q8R1N4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.38■■□□□ 1.01
Nudcd3Q8R1N4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.38■■□□□ 1.01
Nudcd3Q8R1N4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nudcd3Q8R1N4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nudcd3Q8R1N4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nudcd3Q8R1N4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nudcd3Q8R1N4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.37■■□□□ 1.01
Nudcd3Q8R1N4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nudcd3Q8R1N4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Nudcd3Q8R1N4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nudcd3Q8R1N4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Nudcd3Q8R1N4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nudcd3Q8R1N4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nudcd3Q8R1N4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nudcd3Q8R1N4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nudcd3Q8R1N4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nudcd3Q8R1N4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nudcd3Q8R1N4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Nudcd3Q8R1N4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nudcd3Q8R1N4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nudcd3Q8R1N4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.35■■□□□ 1.01
Nudcd3Q8R1N4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Nudcd3Q8R1N4 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.35■■□□□ 1.01
Nudcd3Q8R1N4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nudcd3Q8R1N4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nudcd3Q8R1N4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nudcd3Q8R1N4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.35■■□□□ 1.01
Nudcd3Q8R1N4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Nudcd3Q8R1N4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Nudcd3Q8R1N4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nudcd3Q8R1N4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Nudcd3Q8R1N4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.34■■□□□ 1.01
Nudcd3Q8R1N4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nudcd3Q8R1N4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nudcd3Q8R1N4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nudcd3Q8R1N4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nudcd3Q8R1N4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.34■■□□□ 1.01
Nudcd3Q8R1N4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Nudcd3Q8R1N4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nudcd3Q8R1N4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Nudcd3Q8R1N4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nudcd3Q8R1N4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nudcd3Q8R1N4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nudcd3Q8R1N4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nudcd3Q8R1N4 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.33■■□□□ 1.01
Nudcd3Q8R1N4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
Nudcd3Q8R1N4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Nudcd3Q8R1N4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Nudcd3Q8R1N4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.32■■□□□ 1
Nudcd3Q8R1N4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nudcd3Q8R1N4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Nudcd3Q8R1N4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nudcd3Q8R1N4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nudcd3Q8R1N4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Nudcd3Q8R1N4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Nudcd3Q8R1N4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nudcd3Q8R1N4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nudcd3Q8R1N4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nudcd3Q8R1N4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Nudcd3Q8R1N4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Nudcd3Q8R1N4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nudcd3Q8R1N4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.31■■□□□ 1
Nudcd3Q8R1N4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Nudcd3Q8R1N4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nudcd3Q8R1N4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nudcd3Q8R1N4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nudcd3Q8R1N4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nudcd3Q8R1N4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nudcd3Q8R1N4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nudcd3Q8R1N4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nudcd3Q8R1N4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.29■■□□□ 1
Nudcd3Q8R1N4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Nudcd3Q8R1N4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.28■■□□□ 1
Nudcd3Q8R1N4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Nudcd3Q8R1N4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nudcd3Q8R1N4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Nudcd3Q8R1N4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nudcd3Q8R1N4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nudcd3Q8R1N4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.27■■□□□ 1
Nudcd3Q8R1N4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
Nudcd3Q8R1N4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.27■■□□□ 1
Nudcd3Q8R1N4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Nudcd3Q8R1N4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Nudcd3Q8R1N4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nudcd3Q8R1N4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nudcd3Q8R1N4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nudcd3Q8R1N4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms