Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Zcchc9Q8R1J3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Zcchc9Q8R1J3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Zcchc9Q8R1J3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zcchc9Q8R1J3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Zcchc9Q8R1J3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zcchc9Q8R1J3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zcchc9Q8R1J3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Zcchc9Q8R1J3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Zcchc9Q8R1J3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zcchc9Q8R1J3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zcchc9Q8R1J3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.36■■□□□ 1.01
Zcchc9Q8R1J3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.36■■□□□ 1.01
Zcchc9Q8R1J3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zcchc9Q8R1J3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Zcchc9Q8R1J3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Zcchc9Q8R1J3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zcchc9Q8R1J3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Zcchc9Q8R1J3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.35■■□□□ 1.01
Zcchc9Q8R1J3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.35■■□□□ 1.01
Zcchc9Q8R1J3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.35■■□□□ 1.01
Zcchc9Q8R1J3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.35■■□□□ 1.01
Zcchc9Q8R1J3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zcchc9Q8R1J3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Zcchc9Q8R1J3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Zcchc9Q8R1J3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zcchc9Q8R1J3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zcchc9Q8R1J3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zcchc9Q8R1J3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zcchc9Q8R1J3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zcchc9Q8R1J3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Zcchc9Q8R1J3 Gm7417-201ENSMUST00000192950 473 ntBASIC21.33■■□□□ 1.01
Zcchc9Q8R1J3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.33■■□□□ 1.01
Zcchc9Q8R1J3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Zcchc9Q8R1J3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.32■■□□□ 1
Zcchc9Q8R1J3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.32■■□□□ 1
Zcchc9Q8R1J3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.32■■□□□ 1
Zcchc9Q8R1J3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.32■■□□□ 1
Zcchc9Q8R1J3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Zcchc9Q8R1J3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Zcchc9Q8R1J3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
Zcchc9Q8R1J3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zcchc9Q8R1J3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.31■■□□□ 1
Zcchc9Q8R1J3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.31■■□□□ 1
Zcchc9Q8R1J3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Zcchc9Q8R1J3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.31■■□□□ 1
Zcchc9Q8R1J3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Zcchc9Q8R1J3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Zcchc9Q8R1J3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Zcchc9Q8R1J3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Zcchc9Q8R1J3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.3■■□□□ 1
Zcchc9Q8R1J3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.3■■□□□ 1
Zcchc9Q8R1J3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.3■■□□□ 1
Zcchc9Q8R1J3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.3■■□□□ 1
Zcchc9Q8R1J3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Zcchc9Q8R1J3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Zcchc9Q8R1J3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.29■■□□□ 1
Zcchc9Q8R1J3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.29■■□□□ 1
Zcchc9Q8R1J3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zcchc9Q8R1J3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.29■■□□□ 1
Zcchc9Q8R1J3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zcchc9Q8R1J3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zcchc9Q8R1J3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.28■■□□□ 1
Zcchc9Q8R1J3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zcchc9Q8R1J3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zcchc9Q8R1J3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.28■■□□□ 1
Zcchc9Q8R1J3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.28■■□□□ 1
Zcchc9Q8R1J3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.27■■□□□ 1
Zcchc9Q8R1J3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zcchc9Q8R1J3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zcchc9Q8R1J3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.27■■□□□ 1
Zcchc9Q8R1J3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Zcchc9Q8R1J3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zcchc9Q8R1J3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.27■■□□□ 1
Zcchc9Q8R1J3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.27■■□□□ 1
Zcchc9Q8R1J3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.27■■□□□ 1
Zcchc9Q8R1J3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zcchc9Q8R1J3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zcchc9Q8R1J3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.27■■□□□ 1
Zcchc9Q8R1J3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zcchc9Q8R1J3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zcchc9Q8R1J3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Zcchc9Q8R1J3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Zcchc9Q8R1J3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Zcchc9Q8R1J3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zcchc9Q8R1J3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zcchc9Q8R1J3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zcchc9Q8R1J3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zcchc9Q8R1J3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.25■□□□□ 0.99
Zcchc9Q8R1J3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Zcchc9Q8R1J3 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.25■□□□□ 0.99
Zcchc9Q8R1J3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zcchc9Q8R1J3 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.25■□□□□ 0.99
Zcchc9Q8R1J3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Zcchc9Q8R1J3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zcchc9Q8R1J3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Zcchc9Q8R1J3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.24■□□□□ 0.99
Zcchc9Q8R1J3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zcchc9Q8R1J3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zcchc9Q8R1J3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 112.8 ms