Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rpp40Q8R1F9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.14■■□□□ 1.29
Rpp40Q8R1F9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Rpp40Q8R1F9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rpp40Q8R1F9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
Rpp40Q8R1F9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Rpp40Q8R1F9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rpp40Q8R1F9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rpp40Q8R1F9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rpp40Q8R1F9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.13■■□□□ 1.29
Rpp40Q8R1F9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rpp40Q8R1F9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rpp40Q8R1F9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Rpp40Q8R1F9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rpp40Q8R1F9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rpp40Q8R1F9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rpp40Q8R1F9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Rpp40Q8R1F9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpp40Q8R1F9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpp40Q8R1F9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpp40Q8R1F9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rpp40Q8R1F9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Rpp40Q8R1F9 Gm15820-201ENSMUST00000201566 728 ntBASIC23.12■■□□□ 1.29
Rpp40Q8R1F9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.12■■□□□ 1.29
Rpp40Q8R1F9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
Rpp40Q8R1F9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpp40Q8R1F9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rpp40Q8R1F9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Rpp40Q8R1F9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rpp40Q8R1F9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Rpp40Q8R1F9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rpp40Q8R1F9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.11■■□□□ 1.29
Rpp40Q8R1F9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rpp40Q8R1F9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rpp40Q8R1F9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rpp40Q8R1F9 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.09■■□□□ 1.29
Rpp40Q8R1F9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rpp40Q8R1F9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rpp40Q8R1F9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Rpp40Q8R1F9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Rpp40Q8R1F9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.08■■□□□ 1.29
Rpp40Q8R1F9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.08■■□□□ 1.29
Rpp40Q8R1F9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rpp40Q8R1F9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.08■■□□□ 1.28
Rpp40Q8R1F9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rpp40Q8R1F9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rpp40Q8R1F9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rpp40Q8R1F9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.07■■□□□ 1.28
Rpp40Q8R1F9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rpp40Q8R1F9 Gm10232-201ENSMUST00000089221 720 ntBASIC23.07■■□□□ 1.28
Rpp40Q8R1F9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Rpp40Q8R1F9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpp40Q8R1F9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rpp40Q8R1F9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpp40Q8R1F9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.05■■□□□ 1.28
Rpp40Q8R1F9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rpp40Q8R1F9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rpp40Q8R1F9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.04■■□□□ 1.28
Rpp40Q8R1F9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rpp40Q8R1F9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Rpp40Q8R1F9 Gm11847-201ENSMUST00000125165 1119 ntBASIC23.04■■□□□ 1.28
Rpp40Q8R1F9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.04■■□□□ 1.28
Rpp40Q8R1F9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
Rpp40Q8R1F9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpp40Q8R1F9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpp40Q8R1F9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpp40Q8R1F9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.03■■□□□ 1.28
Rpp40Q8R1F9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpp40Q8R1F9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpp40Q8R1F9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpp40Q8R1F9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC23.03■■□□□ 1.28
Rpp40Q8R1F9 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.03■■□□□ 1.28
Rpp40Q8R1F9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rpp40Q8R1F9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rpp40Q8R1F9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rpp40Q8R1F9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rpp40Q8R1F9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rpp40Q8R1F9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.02■■□□□ 1.28
Rpp40Q8R1F9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rpp40Q8R1F9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rpp40Q8R1F9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rpp40Q8R1F9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rpp40Q8R1F9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpp40Q8R1F9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rpp40Q8R1F9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rpp40Q8R1F9 Gm8093-201ENSMUST00000128935 1892 ntBASIC23■■□□□ 1.27
Rpp40Q8R1F9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rpp40Q8R1F9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rpp40Q8R1F9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rpp40Q8R1F9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rpp40Q8R1F9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Rpp40Q8R1F9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rpp40Q8R1F9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rpp40Q8R1F9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rpp40Q8R1F9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpp40Q8R1F9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpp40Q8R1F9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpp40Q8R1F9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpp40Q8R1F9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpp40Q8R1F9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms