Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Clrn1Q8K445 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Clrn1Q8K445 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clrn1Q8K445 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clrn1Q8K445 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clrn1Q8K445 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.21■□□□□ 0.83
Clrn1Q8K445 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clrn1Q8K445 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clrn1Q8K445 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clrn1Q8K445 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.21■□□□□ 0.83
Clrn1Q8K445 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Clrn1Q8K445 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Clrn1Q8K445 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clrn1Q8K445 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Clrn1Q8K445 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Clrn1Q8K445 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clrn1Q8K445 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.2■□□□□ 0.82
Clrn1Q8K445 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clrn1Q8K445 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Clrn1Q8K445 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clrn1Q8K445 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Clrn1Q8K445 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Clrn1Q8K445 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clrn1Q8K445 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.19■□□□□ 0.82
Clrn1Q8K445 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clrn1Q8K445 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Clrn1Q8K445 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.19■□□□□ 0.82
Clrn1Q8K445 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.19■□□□□ 0.82
Clrn1Q8K445 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clrn1Q8K445 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clrn1Q8K445 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Clrn1Q8K445 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clrn1Q8K445 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clrn1Q8K445 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clrn1Q8K445 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clrn1Q8K445 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Clrn1Q8K445 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.17■□□□□ 0.82
Clrn1Q8K445 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Clrn1Q8K445 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Clrn1Q8K445 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.17■□□□□ 0.82
Clrn1Q8K445 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.17■□□□□ 0.82
Clrn1Q8K445 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clrn1Q8K445 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Clrn1Q8K445 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Clrn1Q8K445 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
Clrn1Q8K445 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.16■□□□□ 0.82
Clrn1Q8K445 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Clrn1Q8K445 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clrn1Q8K445 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Clrn1Q8K445 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clrn1Q8K445 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clrn1Q8K445 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Clrn1Q8K445 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clrn1Q8K445 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clrn1Q8K445 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Clrn1Q8K445 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Clrn1Q8K445 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Clrn1Q8K445 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clrn1Q8K445 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Clrn1Q8K445 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clrn1Q8K445 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clrn1Q8K445 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clrn1Q8K445 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.14■□□□□ 0.81
Clrn1Q8K445 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.14■□□□□ 0.81
Clrn1Q8K445 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Clrn1Q8K445 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clrn1Q8K445 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clrn1Q8K445 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.13■□□□□ 0.81
Clrn1Q8K445 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clrn1Q8K445 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clrn1Q8K445 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.13■□□□□ 0.81
Clrn1Q8K445 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Clrn1Q8K445 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clrn1Q8K445 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Clrn1Q8K445 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Clrn1Q8K445 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.12■□□□□ 0.81
Clrn1Q8K445 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.12■□□□□ 0.81
Clrn1Q8K445 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clrn1Q8K445 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Clrn1Q8K445 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Clrn1Q8K445 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Clrn1Q8K445 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Clrn1Q8K445 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clrn1Q8K445 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Clrn1Q8K445 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clrn1Q8K445 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clrn1Q8K445 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clrn1Q8K445 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clrn1Q8K445 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.1■□□□□ 0.81
Clrn1Q8K445 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.1■□□□□ 0.81
Clrn1Q8K445 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clrn1Q8K445 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clrn1Q8K445 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Clrn1Q8K445 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.1■□□□□ 0.81
Clrn1Q8K445 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Clrn1Q8K445 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Clrn1Q8K445 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.1■□□□□ 0.81
Clrn1Q8K445 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Clrn1Q8K445 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Clrn1Q8K445 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms