Protein–RNA interactions for Protein: Q8K212

Pacs1, Phosphofurin acidic cluster sorting protein 1, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pacs1Q8K212 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pacs1Q8K212 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pacs1Q8K212 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pacs1Q8K212 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pacs1Q8K212 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pacs1Q8K212 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.63■■□□□ 1.05
Pacs1Q8K212 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pacs1Q8K212 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pacs1Q8K212 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.63■■□□□ 1.05
Pacs1Q8K212 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Pacs1Q8K212 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.62■■□□□ 1.05
Pacs1Q8K212 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Pacs1Q8K212 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pacs1Q8K212 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pacs1Q8K212 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Pacs1Q8K212 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pacs1Q8K212 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pacs1Q8K212 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pacs1Q8K212 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pacs1Q8K212 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.61■■□□□ 1.05
Pacs1Q8K212 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pacs1Q8K212 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pacs1Q8K212 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pacs1Q8K212 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pacs1Q8K212 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pacs1Q8K212 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pacs1Q8K212 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Pacs1Q8K212 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.59■■□□□ 1.05
Pacs1Q8K212 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.59■■□□□ 1.05
Pacs1Q8K212 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pacs1Q8K212 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pacs1Q8K212 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pacs1Q8K212 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pacs1Q8K212 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.58■■□□□ 1.05
Pacs1Q8K212 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pacs1Q8K212 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pacs1Q8K212 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pacs1Q8K212 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pacs1Q8K212 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pacs1Q8K212 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Pacs1Q8K212 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.57■■□□□ 1.04
Pacs1Q8K212 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pacs1Q8K212 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pacs1Q8K212 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pacs1Q8K212 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pacs1Q8K212 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pacs1Q8K212 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pacs1Q8K212 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Pacs1Q8K212 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pacs1Q8K212 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Pacs1Q8K212 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pacs1Q8K212 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.56■■□□□ 1.04
Pacs1Q8K212 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pacs1Q8K212 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pacs1Q8K212 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.56■■□□□ 1.04
Pacs1Q8K212 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pacs1Q8K212 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pacs1Q8K212 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pacs1Q8K212 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pacs1Q8K212 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pacs1Q8K212 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pacs1Q8K212 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.55■■□□□ 1.04
Pacs1Q8K212 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
Pacs1Q8K212 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.54■■□□□ 1.04
Pacs1Q8K212 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
Pacs1Q8K212 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pacs1Q8K212 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pacs1Q8K212 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pacs1Q8K212 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.54■■□□□ 1.04
Pacs1Q8K212 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Pacs1Q8K212 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pacs1Q8K212 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.54■■□□□ 1.04
Pacs1Q8K212 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pacs1Q8K212 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pacs1Q8K212 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Pacs1Q8K212 Cap2-205ENSMUST00000225824 1634 ntBASIC21.53■■□□□ 1.04
Pacs1Q8K212 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pacs1Q8K212 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pacs1Q8K212 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pacs1Q8K212 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.52■■□□□ 1.04
Pacs1Q8K212 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.52■■□□□ 1.04
Pacs1Q8K212 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pacs1Q8K212 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pacs1Q8K212 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
Pacs1Q8K212 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.51■■□□□ 1.03
Pacs1Q8K212 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pacs1Q8K212 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Pacs1Q8K212 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pacs1Q8K212 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pacs1Q8K212 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pacs1Q8K212 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pacs1Q8K212 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pacs1Q8K212 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.51■■□□□ 1.03
Pacs1Q8K212 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pacs1Q8K212 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pacs1Q8K212 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
Pacs1Q8K212 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Pacs1Q8K212 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pacs1Q8K212 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pacs1Q8K212 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms