Protein–RNA interactions for Protein: Q8CI15

Sphk1, Sphingosine kinase 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sphk1Q8CI15 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sphk1Q8CI15 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sphk1Q8CI15 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sphk1Q8CI15 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sphk1Q8CI15 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sphk1Q8CI15 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.41■■□□□ 1.02
Sphk1Q8CI15 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.41■■□□□ 1.02
Sphk1Q8CI15 Gm40881-201ENSMUST00000223397 166 ntBASIC21.41■■□□□ 1.02
Sphk1Q8CI15 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sphk1Q8CI15 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.41■■□□□ 1.02
Sphk1Q8CI15 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sphk1Q8CI15 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sphk1Q8CI15 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sphk1Q8CI15 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sphk1Q8CI15 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sphk1Q8CI15 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sphk1Q8CI15 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.4■■□□□ 1.02
Sphk1Q8CI15 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Sphk1Q8CI15 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.4■■□□□ 1.02
Sphk1Q8CI15 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sphk1Q8CI15 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.39■■□□□ 1.02
Sphk1Q8CI15 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.39■■□□□ 1.01
Sphk1Q8CI15 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sphk1Q8CI15 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sphk1Q8CI15 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.38■■□□□ 1.01
Sphk1Q8CI15 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sphk1Q8CI15 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sphk1Q8CI15 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sphk1Q8CI15 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.37■■□□□ 1.01
Sphk1Q8CI15 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sphk1Q8CI15 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sphk1Q8CI15 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.37■■□□□ 1.01
Sphk1Q8CI15 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sphk1Q8CI15 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sphk1Q8CI15 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sphk1Q8CI15 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sphk1Q8CI15 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sphk1Q8CI15 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sphk1Q8CI15 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sphk1Q8CI15 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.36■■□□□ 1.01
Sphk1Q8CI15 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sphk1Q8CI15 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Sphk1Q8CI15 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Sphk1Q8CI15 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sphk1Q8CI15 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sphk1Q8CI15 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sphk1Q8CI15 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Sphk1Q8CI15 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Sphk1Q8CI15 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sphk1Q8CI15 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sphk1Q8CI15 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Sphk1Q8CI15 Gm10399-202ENSMUST00000202768 748 ntBASIC21.35■■□□□ 1.01
Sphk1Q8CI15 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.35■■□□□ 1.01
Sphk1Q8CI15 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Sphk1Q8CI15 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sphk1Q8CI15 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Sphk1Q8CI15 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Sphk1Q8CI15 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sphk1Q8CI15 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sphk1Q8CI15 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sphk1Q8CI15 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sphk1Q8CI15 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sphk1Q8CI15 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sphk1Q8CI15 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sphk1Q8CI15 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sphk1Q8CI15 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Sphk1Q8CI15 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Sphk1Q8CI15 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sphk1Q8CI15 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sphk1Q8CI15 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Sphk1Q8CI15 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sphk1Q8CI15 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sphk1Q8CI15 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sphk1Q8CI15 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sphk1Q8CI15 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sphk1Q8CI15 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
Sphk1Q8CI15 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.31■■□□□ 1
Sphk1Q8CI15 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sphk1Q8CI15 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.31■■□□□ 1
Sphk1Q8CI15 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sphk1Q8CI15 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sphk1Q8CI15 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sphk1Q8CI15 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.3■■□□□ 1
Sphk1Q8CI15 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Sphk1Q8CI15 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.3■■□□□ 1
Sphk1Q8CI15 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Sphk1Q8CI15 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Sphk1Q8CI15 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sphk1Q8CI15 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Sphk1Q8CI15 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sphk1Q8CI15 Gm22238-201ENSMUST00000175222 88 ntBASIC21.29■■□□□ 1
Sphk1Q8CI15 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sphk1Q8CI15 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.29■■□□□ 1
Sphk1Q8CI15 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.28■■□□□ 1
Sphk1Q8CI15 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sphk1Q8CI15 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.28■■□□□ 1
Sphk1Q8CI15 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sphk1Q8CI15 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.28■■□□□ 1
Sphk1Q8CI15 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sphk1Q8CI15 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms