Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Rdh1Q8CGV4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rdh1Q8CGV4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rdh1Q8CGV4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rdh1Q8CGV4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rdh1Q8CGV4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.97■□□□□ 0.95
Rdh1Q8CGV4 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.97■□□□□ 0.95
Rdh1Q8CGV4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Rdh1Q8CGV4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rdh1Q8CGV4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rdh1Q8CGV4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rdh1Q8CGV4 Etf1-202ENSMUST00000180351 108 ntBASIC20.96■□□□□ 0.95
Rdh1Q8CGV4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rdh1Q8CGV4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rdh1Q8CGV4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rdh1Q8CGV4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Rdh1Q8CGV4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.96■□□□□ 0.95
Rdh1Q8CGV4 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.95■□□□□ 0.94
Rdh1Q8CGV4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rdh1Q8CGV4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.95■□□□□ 0.94
Rdh1Q8CGV4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rdh1Q8CGV4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rdh1Q8CGV4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rdh1Q8CGV4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rdh1Q8CGV4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rdh1Q8CGV4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.94■□□□□ 0.94
Rdh1Q8CGV4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rdh1Q8CGV4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.94■□□□□ 0.94
Rdh1Q8CGV4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rdh1Q8CGV4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.93■□□□□ 0.94
Rdh1Q8CGV4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.93■□□□□ 0.94
Rdh1Q8CGV4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rdh1Q8CGV4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rdh1Q8CGV4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rdh1Q8CGV4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rdh1Q8CGV4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rdh1Q8CGV4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rdh1Q8CGV4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rdh1Q8CGV4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.92■□□□□ 0.94
Rdh1Q8CGV4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.92■□□□□ 0.94
Rdh1Q8CGV4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.92■□□□□ 0.94
Rdh1Q8CGV4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rdh1Q8CGV4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rdh1Q8CGV4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rdh1Q8CGV4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rdh1Q8CGV4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Rdh1Q8CGV4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.91■□□□□ 0.94
Rdh1Q8CGV4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rdh1Q8CGV4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rdh1Q8CGV4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rdh1Q8CGV4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.91■□□□□ 0.94
Rdh1Q8CGV4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rdh1Q8CGV4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rdh1Q8CGV4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Rdh1Q8CGV4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rdh1Q8CGV4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rdh1Q8CGV4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Rdh1Q8CGV4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.89■□□□□ 0.93
Rdh1Q8CGV4 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rdh1Q8CGV4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.88■□□□□ 0.93
Rdh1Q8CGV4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rdh1Q8CGV4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rdh1Q8CGV4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rdh1Q8CGV4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.88■□□□□ 0.93
Rdh1Q8CGV4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rdh1Q8CGV4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rdh1Q8CGV4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rdh1Q8CGV4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rdh1Q8CGV4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.87■□□□□ 0.93
Rdh1Q8CGV4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rdh1Q8CGV4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rdh1Q8CGV4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.87■□□□□ 0.93
Rdh1Q8CGV4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rdh1Q8CGV4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rdh1Q8CGV4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rdh1Q8CGV4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rdh1Q8CGV4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rdh1Q8CGV4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.86■□□□□ 0.93
Rdh1Q8CGV4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rdh1Q8CGV4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rdh1Q8CGV4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rdh1Q8CGV4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.85■□□□□ 0.93
Rdh1Q8CGV4 Gm7417-201ENSMUST00000192950 473 ntBASIC20.85■□□□□ 0.93
Rdh1Q8CGV4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rdh1Q8CGV4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rdh1Q8CGV4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rdh1Q8CGV4 Gm40881-201ENSMUST00000223397 166 ntBASIC20.84■□□□□ 0.93
Rdh1Q8CGV4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Rdh1Q8CGV4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rdh1Q8CGV4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rdh1Q8CGV4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Rdh1Q8CGV4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rdh1Q8CGV4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rdh1Q8CGV4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.83■□□□□ 0.93
Rdh1Q8CGV4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.83■□□□□ 0.93
Rdh1Q8CGV4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rdh1Q8CGV4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rdh1Q8CGV4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rdh1Q8CGV4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rdh1Q8CGV4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms