Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC24.91■■□□□ 1.58
Rtp1Q8C8C1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC24.91■■□□□ 1.58
Rtp1Q8C8C1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC24.91■■□□□ 1.58
Rtp1Q8C8C1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rtp1Q8C8C1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC24.9■■□□□ 1.58
Rtp1Q8C8C1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Rtp1Q8C8C1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
Rtp1Q8C8C1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Rtp1Q8C8C1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC24.89■■□□□ 1.58
Rtp1Q8C8C1 Gm29257-201ENSMUST00000186115 639 ntBASIC24.89■■□□□ 1.58
Rtp1Q8C8C1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Rtp1Q8C8C1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC24.89■■□□□ 1.58
Rtp1Q8C8C1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Rtp1Q8C8C1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Rtp1Q8C8C1 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.88■■□□□ 1.57
Rtp1Q8C8C1 Gm11847-201ENSMUST00000125165 1119 ntBASIC24.88■■□□□ 1.57
Rtp1Q8C8C1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Rtp1Q8C8C1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC24.88■■□□□ 1.57
Rtp1Q8C8C1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rtp1Q8C8C1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rtp1Q8C8C1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Rtp1Q8C8C1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Rtp1Q8C8C1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC24.87■■□□□ 1.57
Rtp1Q8C8C1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC24.87■■□□□ 1.57
Rtp1Q8C8C1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rtp1Q8C8C1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Rtp1Q8C8C1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rtp1Q8C8C1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Rtp1Q8C8C1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rtp1Q8C8C1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Rtp1Q8C8C1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rtp1Q8C8C1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rtp1Q8C8C1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
Rtp1Q8C8C1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rtp1Q8C8C1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rtp1Q8C8C1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC24.85■■□□□ 1.57
Rtp1Q8C8C1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rtp1Q8C8C1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rtp1Q8C8C1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Rtp1Q8C8C1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC24.84■■□□□ 1.57
Rtp1Q8C8C1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Rtp1Q8C8C1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC24.84■■□□□ 1.57
Rtp1Q8C8C1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rtp1Q8C8C1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rtp1Q8C8C1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rtp1Q8C8C1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Rtp1Q8C8C1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rtp1Q8C8C1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rtp1Q8C8C1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rtp1Q8C8C1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC24.83■■□□□ 1.57
Rtp1Q8C8C1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Rtp1Q8C8C1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.56
Rtp1Q8C8C1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Rtp1Q8C8C1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Rtp1Q8C8C1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rtp1Q8C8C1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rtp1Q8C8C1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rtp1Q8C8C1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Rtp1Q8C8C1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rtp1Q8C8C1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Rtp1Q8C8C1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Rtp1Q8C8C1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC24.81■■□□□ 1.56
Rtp1Q8C8C1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Rtp1Q8C8C1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Rtp1Q8C8C1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Rtp1Q8C8C1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rtp1Q8C8C1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC24.8■■□□□ 1.56
Rtp1Q8C8C1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rtp1Q8C8C1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Rtp1Q8C8C1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rtp1Q8C8C1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC24.79■■□□□ 1.56
Rtp1Q8C8C1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC24.79■■□□□ 1.56
Rtp1Q8C8C1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Rtp1Q8C8C1 Gm8093-201ENSMUST00000128935 1892 ntBASIC24.79■■□□□ 1.56
Rtp1Q8C8C1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Rtp1Q8C8C1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rtp1Q8C8C1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rtp1Q8C8C1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rtp1Q8C8C1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rtp1Q8C8C1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Rtp1Q8C8C1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rtp1Q8C8C1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rtp1Q8C8C1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rtp1Q8C8C1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC24.77■■□□□ 1.56
Rtp1Q8C8C1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rtp1Q8C8C1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Rtp1Q8C8C1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rtp1Q8C8C1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rtp1Q8C8C1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.76■■□□□ 1.55
Rtp1Q8C8C1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.76■■□□□ 1.55
Rtp1Q8C8C1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rtp1Q8C8C1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Rtp1Q8C8C1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rtp1Q8C8C1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rtp1Q8C8C1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rtp1Q8C8C1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Rtp1Q8C8C1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Rtp1Q8C8C1 Gm2011-201ENSMUST00000203124 1263 ntBASIC24.75■■□□□ 1.55
Rtp1Q8C8C1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Rtp1Q8C8C1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms