Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.71■□□□□ 0.91
Ccdc90bQ8C3X2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc90bQ8C3X2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc90bQ8C3X2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc90bQ8C3X2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc90bQ8C3X2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ccdc90bQ8C3X2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc90bQ8C3X2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.7■□□□□ 0.9
Ccdc90bQ8C3X2 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.7■□□□□ 0.9
Ccdc90bQ8C3X2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc90bQ8C3X2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc90bQ8C3X2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ccdc90bQ8C3X2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc90bQ8C3X2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc90bQ8C3X2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc90bQ8C3X2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc90bQ8C3X2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ccdc90bQ8C3X2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.69■□□□□ 0.9
Ccdc90bQ8C3X2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc90bQ8C3X2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.68■□□□□ 0.9
Ccdc90bQ8C3X2 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.68■□□□□ 0.9
Ccdc90bQ8C3X2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc90bQ8C3X2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc90bQ8C3X2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Ccdc90bQ8C3X2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc90bQ8C3X2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Ccdc90bQ8C3X2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc90bQ8C3X2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc90bQ8C3X2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc90bQ8C3X2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc90bQ8C3X2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc90bQ8C3X2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc90bQ8C3X2 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.67■□□□□ 0.9
Ccdc90bQ8C3X2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc90bQ8C3X2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccdc90bQ8C3X2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.67■□□□□ 0.9
Ccdc90bQ8C3X2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ccdc90bQ8C3X2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc90bQ8C3X2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc90bQ8C3X2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc90bQ8C3X2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc90bQ8C3X2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccdc90bQ8C3X2 Gm9812-201ENSMUST00000061934 968 ntBASIC20.66■□□□□ 0.9
Ccdc90bQ8C3X2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc90bQ8C3X2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc90bQ8C3X2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc90bQ8C3X2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc90bQ8C3X2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc90bQ8C3X2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc90bQ8C3X2 Gm6821-201ENSMUST00000107540 542 ntBASIC20.65■□□□□ 0.9
Ccdc90bQ8C3X2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.65■□□□□ 0.9
Ccdc90bQ8C3X2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc90bQ8C3X2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc90bQ8C3X2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc90bQ8C3X2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc90bQ8C3X2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc90bQ8C3X2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc90bQ8C3X2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc90bQ8C3X2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.63■□□□□ 0.89
Ccdc90bQ8C3X2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc90bQ8C3X2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc90bQ8C3X2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc90bQ8C3X2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc90bQ8C3X2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ccdc90bQ8C3X2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc90bQ8C3X2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc90bQ8C3X2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc90bQ8C3X2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.62■□□□□ 0.89
Ccdc90bQ8C3X2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc90bQ8C3X2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc90bQ8C3X2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc90bQ8C3X2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc90bQ8C3X2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc90bQ8C3X2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc90bQ8C3X2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccdc90bQ8C3X2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.6■□□□□ 0.89
Ccdc90bQ8C3X2 Notumos-201ENSMUST00000151998 2659 ntBASIC20.6■□□□□ 0.89
Ccdc90bQ8C3X2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Ccdc90bQ8C3X2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.6■□□□□ 0.89
Ccdc90bQ8C3X2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc90bQ8C3X2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc90bQ8C3X2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc90bQ8C3X2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc90bQ8C3X2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc90bQ8C3X2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc90bQ8C3X2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.59■□□□□ 0.89
Ccdc90bQ8C3X2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc90bQ8C3X2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccdc90bQ8C3X2 Terc-201ENSMUST00000082862 423 ntBASIC20.58■□□□□ 0.89
Ccdc90bQ8C3X2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc90bQ8C3X2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc90bQ8C3X2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ccdc90bQ8C3X2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ccdc90bQ8C3X2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ccdc90bQ8C3X2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Ccdc90bQ8C3X2 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.57■□□□□ 0.88
Ccdc90bQ8C3X2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ccdc90bQ8C3X2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc90bQ8C3X2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccdc90bQ8C3X2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms