Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rft1Q8C3B8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rft1Q8C3B8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rft1Q8C3B8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rft1Q8C3B8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rft1Q8C3B8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rft1Q8C3B8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rft1Q8C3B8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rft1Q8C3B8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rft1Q8C3B8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rft1Q8C3B8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rft1Q8C3B8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rft1Q8C3B8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.95■□□□□ 0.62
Rft1Q8C3B8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rft1Q8C3B8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Rft1Q8C3B8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.94■□□□□ 0.62
Rft1Q8C3B8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rft1Q8C3B8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rft1Q8C3B8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rft1Q8C3B8 Cap2-205ENSMUST00000225824 1634 ntBASIC18.93■□□□□ 0.62
Rft1Q8C3B8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.93■□□□□ 0.62
Rft1Q8C3B8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rft1Q8C3B8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rft1Q8C3B8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rft1Q8C3B8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rft1Q8C3B8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rft1Q8C3B8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rft1Q8C3B8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rft1Q8C3B8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rft1Q8C3B8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rft1Q8C3B8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.92■□□□□ 0.62
Rft1Q8C3B8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Rft1Q8C3B8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rft1Q8C3B8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rft1Q8C3B8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rft1Q8C3B8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rft1Q8C3B8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rft1Q8C3B8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rft1Q8C3B8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rft1Q8C3B8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Rft1Q8C3B8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rft1Q8C3B8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.91■□□□□ 0.62
Rft1Q8C3B8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.91■□□□□ 0.62
Rft1Q8C3B8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rft1Q8C3B8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rft1Q8C3B8 Notumos-201ENSMUST00000151998 2659 ntBASIC18.91■□□□□ 0.62
Rft1Q8C3B8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rft1Q8C3B8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
Rft1Q8C3B8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rft1Q8C3B8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rft1Q8C3B8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rft1Q8C3B8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rft1Q8C3B8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rft1Q8C3B8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Rft1Q8C3B8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.9■□□□□ 0.62
Rft1Q8C3B8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Rft1Q8C3B8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rft1Q8C3B8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rft1Q8C3B8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.89■□□□□ 0.61
Rft1Q8C3B8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rft1Q8C3B8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rft1Q8C3B8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rft1Q8C3B8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Rft1Q8C3B8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.89■□□□□ 0.61
Rft1Q8C3B8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rft1Q8C3B8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rft1Q8C3B8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rft1Q8C3B8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.88■□□□□ 0.61
Rft1Q8C3B8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.88■□□□□ 0.61
Rft1Q8C3B8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Rft1Q8C3B8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.88■□□□□ 0.61
Rft1Q8C3B8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rft1Q8C3B8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rft1Q8C3B8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rft1Q8C3B8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rft1Q8C3B8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rft1Q8C3B8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.87■□□□□ 0.61
Rft1Q8C3B8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.87■□□□□ 0.61
Rft1Q8C3B8 Gm12366-201ENSMUST00000121722 873 ntBASIC18.87■□□□□ 0.61
Rft1Q8C3B8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.87■□□□□ 0.61
Rft1Q8C3B8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rft1Q8C3B8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rft1Q8C3B8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.87■□□□□ 0.61
Rft1Q8C3B8 Gm5786-201ENSMUST00000085368 882 ntBASIC18.87■□□□□ 0.61
Rft1Q8C3B8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rft1Q8C3B8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rft1Q8C3B8 Gm27502-201ENSMUST00000183495 199 ntBASIC18.86■□□□□ 0.61
Rft1Q8C3B8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.86■□□□□ 0.61
Rft1Q8C3B8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rft1Q8C3B8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rft1Q8C3B8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rft1Q8C3B8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rft1Q8C3B8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rft1Q8C3B8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Rft1Q8C3B8 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.85■□□□□ 0.61
Rft1Q8C3B8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rft1Q8C3B8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rft1Q8C3B8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rft1Q8C3B8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rft1Q8C3B8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms