Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf3Q8C120 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.37■■□□□ 1.17
Sh3rf3Q8C120 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sh3rf3Q8C120 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sh3rf3Q8C120 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sh3rf3Q8C120 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sh3rf3Q8C120 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.36■■□□□ 1.17
Sh3rf3Q8C120 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sh3rf3Q8C120 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sh3rf3Q8C120 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.36■■□□□ 1.17
Sh3rf3Q8C120 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Sh3rf3Q8C120 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.36■■□□□ 1.17
Sh3rf3Q8C120 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.36■■□□□ 1.17
Sh3rf3Q8C120 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sh3rf3Q8C120 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.36■■□□□ 1.17
Sh3rf3Q8C120 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf3Q8C120 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3rf3Q8C120 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sh3rf3Q8C120 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Sh3rf3Q8C120 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sh3rf3Q8C120 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
Sh3rf3Q8C120 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Sh3rf3Q8C120 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sh3rf3Q8C120 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sh3rf3Q8C120 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.32■■□□□ 1.16
Sh3rf3Q8C120 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3rf3Q8C120 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3rf3Q8C120 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.32■■□□□ 1.16
Sh3rf3Q8C120 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3rf3Q8C120 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3rf3Q8C120 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3rf3Q8C120 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3rf3Q8C120 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.31■■□□□ 1.16
Sh3rf3Q8C120 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3rf3Q8C120 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.31■■□□□ 1.16
Sh3rf3Q8C120 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3rf3Q8C120 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3rf3Q8C120 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3rf3Q8C120 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3rf3Q8C120 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3rf3Q8C120 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3rf3Q8C120 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.3■■□□□ 1.16
Sh3rf3Q8C120 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3rf3Q8C120 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3rf3Q8C120 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3rf3Q8C120 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.29■■□□□ 1.16
Sh3rf3Q8C120 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sh3rf3Q8C120 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh3rf3Q8C120 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh3rf3Q8C120 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3rf3Q8C120 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
Sh3rf3Q8C120 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3rf3Q8C120 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Sh3rf3Q8C120 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3rf3Q8C120 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.28■■□□□ 1.16
Sh3rf3Q8C120 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3rf3Q8C120 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3rf3Q8C120 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3rf3Q8C120 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3rf3Q8C120 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Sh3rf3Q8C120 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Sh3rf3Q8C120 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.25■■□□□ 1.15
Sh3rf3Q8C120 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sh3rf3Q8C120 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Sh3rf3Q8C120 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Sh3rf3Q8C120 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.25■■□□□ 1.15
Sh3rf3Q8C120 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sh3rf3Q8C120 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sh3rf3Q8C120 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3rf3Q8C120 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3rf3Q8C120 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 113.3 ms