Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cpne3Q8BT60 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne3Q8BT60 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne3Q8BT60 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne3Q8BT60 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne3Q8BT60 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpne3Q8BT60 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpne3Q8BT60 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpne3Q8BT60 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cpne3Q8BT60 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpne3Q8BT60 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.6■□□□□ 0.89
Cpne3Q8BT60 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpne3Q8BT60 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cpne3Q8BT60 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.6■□□□□ 0.89
Cpne3Q8BT60 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpne3Q8BT60 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cpne3Q8BT60 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpne3Q8BT60 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpne3Q8BT60 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.59■□□□□ 0.89
Cpne3Q8BT60 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpne3Q8BT60 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpne3Q8BT60 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpne3Q8BT60 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpne3Q8BT60 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpne3Q8BT60 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cpne3Q8BT60 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Cpne3Q8BT60 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpne3Q8BT60 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Cpne3Q8BT60 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne3Q8BT60 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne3Q8BT60 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne3Q8BT60 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne3Q8BT60 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne3Q8BT60 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.57■□□□□ 0.88
Cpne3Q8BT60 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Cpne3Q8BT60 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne3Q8BT60 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne3Q8BT60 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.57■□□□□ 0.88
Cpne3Q8BT60 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne3Q8BT60 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne3Q8BT60 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Cpne3Q8BT60 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cpne3Q8BT60 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne3Q8BT60 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.56■□□□□ 0.88
Cpne3Q8BT60 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne3Q8BT60 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne3Q8BT60 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne3Q8BT60 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.56■□□□□ 0.88
Cpne3Q8BT60 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.56■□□□□ 0.88
Cpne3Q8BT60 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne3Q8BT60 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cpne3Q8BT60 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cpne3Q8BT60 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne3Q8BT60 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne3Q8BT60 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne3Q8BT60 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne3Q8BT60 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Cpne3Q8BT60 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne3Q8BT60 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.55■□□□□ 0.88
Cpne3Q8BT60 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cpne3Q8BT60 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpne3Q8BT60 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Cpne3Q8BT60 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpne3Q8BT60 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.54■□□□□ 0.88
Cpne3Q8BT60 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpne3Q8BT60 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.54■□□□□ 0.88
Cpne3Q8BT60 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpne3Q8BT60 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cpne3Q8BT60 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpne3Q8BT60 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpne3Q8BT60 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpne3Q8BT60 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpne3Q8BT60 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpne3Q8BT60 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpne3Q8BT60 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpne3Q8BT60 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpne3Q8BT60 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.52■□□□□ 0.88
Cpne3Q8BT60 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpne3Q8BT60 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.52■□□□□ 0.88
Cpne3Q8BT60 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpne3Q8BT60 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpne3Q8BT60 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpne3Q8BT60 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpne3Q8BT60 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpne3Q8BT60 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpne3Q8BT60 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cpne3Q8BT60 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cpne3Q8BT60 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cpne3Q8BT60 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpne3Q8BT60 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Cpne3Q8BT60 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpne3Q8BT60 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.51■□□□□ 0.87
Cpne3Q8BT60 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpne3Q8BT60 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.51■□□□□ 0.87
Cpne3Q8BT60 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cpne3Q8BT60 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cpne3Q8BT60 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpne3Q8BT60 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cpne3Q8BT60 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.5■□□□□ 0.87
Cpne3Q8BT60 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms