Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Gm40881-201ENSMUST00000223397 166 ntBASIC24.8■■□□□ 1.56
Scfd1Q8BRF7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Scfd1Q8BRF7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Scfd1Q8BRF7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Scfd1Q8BRF7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Scfd1Q8BRF7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Scfd1Q8BRF7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Scfd1Q8BRF7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Scfd1Q8BRF7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Scfd1Q8BRF7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Scfd1Q8BRF7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC24.78■■□□□ 1.56
Scfd1Q8BRF7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Scfd1Q8BRF7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Scfd1Q8BRF7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Scfd1Q8BRF7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC24.77■■□□□ 1.56
Scfd1Q8BRF7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC24.77■■□□□ 1.56
Scfd1Q8BRF7 Gm10399-202ENSMUST00000202768 748 ntBASIC24.77■■□□□ 1.56
Scfd1Q8BRF7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Scfd1Q8BRF7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Scfd1Q8BRF7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Scfd1Q8BRF7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Scfd1Q8BRF7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Scfd1Q8BRF7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Scfd1Q8BRF7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.76■■□□□ 1.55
Scfd1Q8BRF7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Scfd1Q8BRF7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Scfd1Q8BRF7 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Scfd1Q8BRF7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Scfd1Q8BRF7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Scfd1Q8BRF7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC24.75■■□□□ 1.55
Scfd1Q8BRF7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Scfd1Q8BRF7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Scfd1Q8BRF7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Scfd1Q8BRF7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Scfd1Q8BRF7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Scfd1Q8BRF7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC24.73■■□□□ 1.55
Scfd1Q8BRF7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Scfd1Q8BRF7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Scfd1Q8BRF7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Scfd1Q8BRF7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Scfd1Q8BRF7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Scfd1Q8BRF7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Scfd1Q8BRF7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Scfd1Q8BRF7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Scfd1Q8BRF7 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Scfd1Q8BRF7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Scfd1Q8BRF7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Scfd1Q8BRF7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Scfd1Q8BRF7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Scfd1Q8BRF7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.71■■□□□ 1.55
Scfd1Q8BRF7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC24.71■■□□□ 1.55
Scfd1Q8BRF7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Scfd1Q8BRF7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Scfd1Q8BRF7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
Scfd1Q8BRF7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC24.7■■□□□ 1.55
Scfd1Q8BRF7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Scfd1Q8BRF7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Scfd1Q8BRF7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
Scfd1Q8BRF7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
Scfd1Q8BRF7 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.7■■□□□ 1.54
Scfd1Q8BRF7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
Scfd1Q8BRF7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Scfd1Q8BRF7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Scfd1Q8BRF7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Scfd1Q8BRF7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Scfd1Q8BRF7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Scfd1Q8BRF7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Scfd1Q8BRF7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Scfd1Q8BRF7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
Scfd1Q8BRF7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Scfd1Q8BRF7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Scfd1Q8BRF7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Scfd1Q8BRF7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Scfd1Q8BRF7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Scfd1Q8BRF7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Scfd1Q8BRF7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Scfd1Q8BRF7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Scfd1Q8BRF7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Scfd1Q8BRF7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Scfd1Q8BRF7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Scfd1Q8BRF7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Scfd1Q8BRF7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Scfd1Q8BRF7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC24.66■■□□□ 1.54
Scfd1Q8BRF7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Scfd1Q8BRF7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Scfd1Q8BRF7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Scfd1Q8BRF7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Scfd1Q8BRF7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Scfd1Q8BRF7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Scfd1Q8BRF7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC24.65■■□□□ 1.54
Scfd1Q8BRF7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC24.65■■□□□ 1.54
Scfd1Q8BRF7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Scfd1Q8BRF7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Scfd1Q8BRF7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Scfd1Q8BRF7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Scfd1Q8BRF7 Gm22238-201ENSMUST00000175222 88 ntBASIC24.64■■□□□ 1.54
Scfd1Q8BRF7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Scfd1Q8BRF7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Scfd1Q8BRF7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Scfd1Q8BRF7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms