Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Rab11fip4Q8BQP8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rab11fip4Q8BQP8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Rab11fip4Q8BQP8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rab11fip4Q8BQP8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rab11fip4Q8BQP8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rab11fip4Q8BQP8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rab11fip4Q8BQP8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rab11fip4Q8BQP8 Gm22567-201ENSMUST00000175542 342 ntBASIC23.67■■□□□ 1.38
Rab11fip4Q8BQP8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rab11fip4Q8BQP8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rab11fip4Q8BQP8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rab11fip4Q8BQP8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rab11fip4Q8BQP8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.66■■□□□ 1.38
Rab11fip4Q8BQP8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.66■■□□□ 1.38
Rab11fip4Q8BQP8 Gm15820-201ENSMUST00000201566 728 ntBASIC23.66■■□□□ 1.38
Rab11fip4Q8BQP8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rab11fip4Q8BQP8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rab11fip4Q8BQP8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rab11fip4Q8BQP8 Gm13238-201ENSMUST00000117655 780 ntBASIC23.65■■□□□ 1.38
Rab11fip4Q8BQP8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rab11fip4Q8BQP8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rab11fip4Q8BQP8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Rab11fip4Q8BQP8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rab11fip4Q8BQP8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rab11fip4Q8BQP8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rab11fip4Q8BQP8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.63■■□□□ 1.37
Rab11fip4Q8BQP8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rab11fip4Q8BQP8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rab11fip4Q8BQP8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rab11fip4Q8BQP8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Rab11fip4Q8BQP8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Rab11fip4Q8BQP8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rab11fip4Q8BQP8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
Rab11fip4Q8BQP8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rab11fip4Q8BQP8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.62■■□□□ 1.37
Rab11fip4Q8BQP8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.62■■□□□ 1.37
Rab11fip4Q8BQP8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rab11fip4Q8BQP8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.62■■□□□ 1.37
Rab11fip4Q8BQP8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rab11fip4Q8BQP8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rab11fip4Q8BQP8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Rab11fip4Q8BQP8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.61■■□□□ 1.37
Rab11fip4Q8BQP8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.61■■□□□ 1.37
Rab11fip4Q8BQP8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Rab11fip4Q8BQP8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.6■■□□□ 1.37
Rab11fip4Q8BQP8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Rab11fip4Q8BQP8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.6■■□□□ 1.37
Rab11fip4Q8BQP8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rab11fip4Q8BQP8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rab11fip4Q8BQP8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.6■■□□□ 1.37
Rab11fip4Q8BQP8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rab11fip4Q8BQP8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rab11fip4Q8BQP8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rab11fip4Q8BQP8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rab11fip4Q8BQP8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rab11fip4Q8BQP8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rab11fip4Q8BQP8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Rab11fip4Q8BQP8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.59■■□□□ 1.37
Rab11fip4Q8BQP8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rab11fip4Q8BQP8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rab11fip4Q8BQP8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Rab11fip4Q8BQP8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rab11fip4Q8BQP8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rab11fip4Q8BQP8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
Rab11fip4Q8BQP8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rab11fip4Q8BQP8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Rab11fip4Q8BQP8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rab11fip4Q8BQP8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rab11fip4Q8BQP8 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.57■■□□□ 1.36
Rab11fip4Q8BQP8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rab11fip4Q8BQP8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.57■■□□□ 1.36
Rab11fip4Q8BQP8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rab11fip4Q8BQP8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rab11fip4Q8BQP8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Rab11fip4Q8BQP8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rab11fip4Q8BQP8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC23.56■■□□□ 1.36
Rab11fip4Q8BQP8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Rab11fip4Q8BQP8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Rab11fip4Q8BQP8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Rab11fip4Q8BQP8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Rab11fip4Q8BQP8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Rab11fip4Q8BQP8 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.56■■□□□ 1.36
Rab11fip4Q8BQP8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.56■■□□□ 1.36
Rab11fip4Q8BQP8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.55■■□□□ 1.36
Rab11fip4Q8BQP8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rab11fip4Q8BQP8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.55■■□□□ 1.36
Rab11fip4Q8BQP8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rab11fip4Q8BQP8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.54■■□□□ 1.36
Rab11fip4Q8BQP8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.54■■□□□ 1.36
Rab11fip4Q8BQP8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rab11fip4Q8BQP8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Rab11fip4Q8BQP8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rab11fip4Q8BQP8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rab11fip4Q8BQP8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Rab11fip4Q8BQP8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.53■■□□□ 1.36
Rab11fip4Q8BQP8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rab11fip4Q8BQP8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rab11fip4Q8BQP8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rab11fip4Q8BQP8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms