Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl3Q8BLF2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cdkl3Q8BLF2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl3Q8BLF2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkl3Q8BLF2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl3Q8BLF2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.44■□□□□ 0.54
Cdkl3Q8BLF2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Cdkl3Q8BLF2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl3Q8BLF2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl3Q8BLF2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.44■□□□□ 0.54
Cdkl3Q8BLF2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl3Q8BLF2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkl3Q8BLF2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cdkl3Q8BLF2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.42■□□□□ 0.54
Cdkl3Q8BLF2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl3Q8BLF2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.42■□□□□ 0.54
Cdkl3Q8BLF2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl3Q8BLF2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl3Q8BLF2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl3Q8BLF2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdkl3Q8BLF2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
Cdkl3Q8BLF2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl3Q8BLF2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl3Q8BLF2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl3Q8BLF2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl3Q8BLF2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl3Q8BLF2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl3Q8BLF2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl3Q8BLF2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl3Q8BLF2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl3Q8BLF2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl3Q8BLF2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cdkl3Q8BLF2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdkl3Q8BLF2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl3Q8BLF2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdkl3Q8BLF2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Cdkl3Q8BLF2 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.39■□□□□ 0.53
Cdkl3Q8BLF2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cdkl3Q8BLF2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl3Q8BLF2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Cdkl3Q8BLF2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl3Q8BLF2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl3Q8BLF2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl3Q8BLF2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.39■□□□□ 0.53
Cdkl3Q8BLF2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cdkl3Q8BLF2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdkl3Q8BLF2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl3Q8BLF2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cdkl3Q8BLF2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl3Q8BLF2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.38■□□□□ 0.53
Cdkl3Q8BLF2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdkl3Q8BLF2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cdkl3Q8BLF2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Cdkl3Q8BLF2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.37■□□□□ 0.53
Cdkl3Q8BLF2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl3Q8BLF2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl3Q8BLF2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl3Q8BLF2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl3Q8BLF2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl3Q8BLF2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl3Q8BLF2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl3Q8BLF2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl3Q8BLF2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl3Q8BLF2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.37■□□□□ 0.53
Cdkl3Q8BLF2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl3Q8BLF2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdkl3Q8BLF2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdkl3Q8BLF2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdkl3Q8BLF2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdkl3Q8BLF2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdkl3Q8BLF2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdkl3Q8BLF2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkl3Q8BLF2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkl3Q8BLF2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdkl3Q8BLF2 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.34■□□□□ 0.53
Cdkl3Q8BLF2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdkl3Q8BLF2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Cdkl3Q8BLF2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdkl3Q8BLF2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdkl3Q8BLF2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.33■□□□□ 0.52
Cdkl3Q8BLF2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkl3Q8BLF2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Cdkl3Q8BLF2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkl3Q8BLF2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdkl3Q8BLF2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cdkl3Q8BLF2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl3Q8BLF2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.32■□□□□ 0.52
Cdkl3Q8BLF2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Cdkl3Q8BLF2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl3Q8BLF2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl3Q8BLF2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl3Q8BLF2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdkl3Q8BLF2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl3Q8BLF2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl3Q8BLF2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cdkl3Q8BLF2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl3Q8BLF2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.31■□□□□ 0.52
Cdkl3Q8BLF2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdkl3Q8BLF2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Cdkl3Q8BLF2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms