Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf38Q8BI21 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf38Q8BI21 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf38Q8BI21 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.65■□□□□ 0.9
Rnf38Q8BI21 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf38Q8BI21 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf38Q8BI21 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf38Q8BI21 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Rnf38Q8BI21 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rnf38Q8BI21 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf38Q8BI21 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf38Q8BI21 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf38Q8BI21 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf38Q8BI21 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf38Q8BI21 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rnf38Q8BI21 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf38Q8BI21 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf38Q8BI21 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf38Q8BI21 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf38Q8BI21 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf38Q8BI21 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Rnf38Q8BI21 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf38Q8BI21 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf38Q8BI21 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.63■□□□□ 0.89
Rnf38Q8BI21 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf38Q8BI21 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf38Q8BI21 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf38Q8BI21 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.62■□□□□ 0.89
Rnf38Q8BI21 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rnf38Q8BI21 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf38Q8BI21 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf38Q8BI21 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf38Q8BI21 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rnf38Q8BI21 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf38Q8BI21 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf38Q8BI21 Scarna2-201ENSMUST00000157560 414 ntBASIC20.61■□□□□ 0.89
Rnf38Q8BI21 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.61■□□□□ 0.89
Rnf38Q8BI21 Gm16437-201ENSMUST00000025669 507 ntBASIC20.61■□□□□ 0.89
Rnf38Q8BI21 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf38Q8BI21 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf38Q8BI21 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf38Q8BI21 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.6■□□□□ 0.89
Rnf38Q8BI21 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf38Q8BI21 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf38Q8BI21 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf38Q8BI21 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.59■□□□□ 0.89
Rnf38Q8BI21 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf38Q8BI21 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf38Q8BI21 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rnf38Q8BI21 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.59■□□□□ 0.89
Rnf38Q8BI21 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.59■□□□□ 0.89
Rnf38Q8BI21 Gm9806-201ENSMUST00000051080 552 ntBASIC20.59■□□□□ 0.89
Rnf38Q8BI21 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rnf38Q8BI21 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rnf38Q8BI21 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf38Q8BI21 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rnf38Q8BI21 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf38Q8BI21 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.58■□□□□ 0.89
Rnf38Q8BI21 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf38Q8BI21 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf38Q8BI21 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rnf38Q8BI21 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rnf38Q8BI21 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rnf38Q8BI21 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.56■□□□□ 0.88
Rnf38Q8BI21 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf38Q8BI21 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf38Q8BI21 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf38Q8BI21 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf38Q8BI21 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf38Q8BI21 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf38Q8BI21 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf38Q8BI21 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf38Q8BI21 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf38Q8BI21 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf38Q8BI21 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf38Q8BI21 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rnf38Q8BI21 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf38Q8BI21 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf38Q8BI21 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf38Q8BI21 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf38Q8BI21 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rnf38Q8BI21 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf38Q8BI21 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Rnf38Q8BI21 Gm11175-201ENSMUST00000116172 543 ntBASIC20.54■□□□□ 0.88
Rnf38Q8BI21 Gm11687-201ENSMUST00000118911 886 ntBASIC20.54■□□□□ 0.88
Rnf38Q8BI21 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rnf38Q8BI21 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf38Q8BI21 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf38Q8BI21 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf38Q8BI21 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf38Q8BI21 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
Rnf38Q8BI21 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.53■□□□□ 0.88
Rnf38Q8BI21 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf38Q8BI21 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf38Q8BI21 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf38Q8BI21 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.53■□□□□ 0.88
Rnf38Q8BI21 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf38Q8BI21 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.53■□□□□ 0.88
Rnf38Q8BI21 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf38Q8BI21 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms