Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Depdc1bQ8BH88 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Depdc1bQ8BH88 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Depdc1bQ8BH88 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Depdc1bQ8BH88 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Depdc1bQ8BH88 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Depdc1bQ8BH88 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Depdc1bQ8BH88 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.21■■□□□ 1.31
Depdc1bQ8BH88 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Depdc1bQ8BH88 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.31
Depdc1bQ8BH88 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Depdc1bQ8BH88 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Depdc1bQ8BH88 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Depdc1bQ8BH88 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Depdc1bQ8BH88 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Depdc1bQ8BH88 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Depdc1bQ8BH88 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Depdc1bQ8BH88 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Depdc1bQ8BH88 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Depdc1bQ8BH88 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Depdc1bQ8BH88 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Depdc1bQ8BH88 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Depdc1bQ8BH88 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Depdc1bQ8BH88 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Depdc1bQ8BH88 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.18■■□□□ 1.3
Depdc1bQ8BH88 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.17■■□□□ 1.3
Depdc1bQ8BH88 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Depdc1bQ8BH88 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Depdc1bQ8BH88 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Depdc1bQ8BH88 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Depdc1bQ8BH88 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.17■■□□□ 1.3
Depdc1bQ8BH88 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Depdc1bQ8BH88 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Depdc1bQ8BH88 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Depdc1bQ8BH88 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Depdc1bQ8BH88 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Depdc1bQ8BH88 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Depdc1bQ8BH88 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Depdc1bQ8BH88 AC124392.1-201ENSMUST00000225172 5324 ntBASIC23.16■■□□□ 1.3
Depdc1bQ8BH88 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Depdc1bQ8BH88 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.15■■□□□ 1.3
Depdc1bQ8BH88 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.15■■□□□ 1.3
Depdc1bQ8BH88 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Depdc1bQ8BH88 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.15■■□□□ 1.3
Depdc1bQ8BH88 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Depdc1bQ8BH88 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Depdc1bQ8BH88 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Depdc1bQ8BH88 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.14■■□□□ 1.29
Depdc1bQ8BH88 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Depdc1bQ8BH88 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Depdc1bQ8BH88 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.14■■□□□ 1.29
Depdc1bQ8BH88 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Depdc1bQ8BH88 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Depdc1bQ8BH88 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Depdc1bQ8BH88 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Depdc1bQ8BH88 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Depdc1bQ8BH88 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Depdc1bQ8BH88 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Depdc1bQ8BH88 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.13■■□□□ 1.29
Depdc1bQ8BH88 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Depdc1bQ8BH88 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.13■■□□□ 1.29
Depdc1bQ8BH88 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.13■■□□□ 1.29
Depdc1bQ8BH88 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Depdc1bQ8BH88 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.13■■□□□ 1.29
Depdc1bQ8BH88 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Depdc1bQ8BH88 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Depdc1bQ8BH88 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Depdc1bQ8BH88 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Depdc1bQ8BH88 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Depdc1bQ8BH88 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Depdc1bQ8BH88 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Depdc1bQ8BH88 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
Depdc1bQ8BH88 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Depdc1bQ8BH88 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Depdc1bQ8BH88 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Depdc1bQ8BH88 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Depdc1bQ8BH88 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Depdc1bQ8BH88 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Depdc1bQ8BH88 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Depdc1bQ8BH88 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Depdc1bQ8BH88 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Depdc1bQ8BH88 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Depdc1bQ8BH88 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Depdc1bQ8BH88 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Depdc1bQ8BH88 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Depdc1bQ8BH88 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
Depdc1bQ8BH88 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Depdc1bQ8BH88 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.1■■□□□ 1.29
Depdc1bQ8BH88 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Depdc1bQ8BH88 Gm15546-201ENSMUST00000122095 826 ntBASIC23.1■■□□□ 1.29
Depdc1bQ8BH88 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC23.09■■□□□ 1.29
Depdc1bQ8BH88 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Depdc1bQ8BH88 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Depdc1bQ8BH88 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Depdc1bQ8BH88 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Depdc1bQ8BH88 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.09■■□□□ 1.29
Depdc1bQ8BH88 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Depdc1bQ8BH88 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Depdc1bQ8BH88 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Depdc1bQ8BH88 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms