Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Atg4bQ8BGE6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Atg4bQ8BGE6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atg4bQ8BGE6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Atg4bQ8BGE6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atg4bQ8BGE6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.23■□□□□ 0.83
Atg4bQ8BGE6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4bQ8BGE6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Atg4bQ8BGE6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Atg4bQ8BGE6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Atg4bQ8BGE6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4bQ8BGE6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4bQ8BGE6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4bQ8BGE6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.23■□□□□ 0.83
Atg4bQ8BGE6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.23■□□□□ 0.83
Atg4bQ8BGE6 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.23■□□□□ 0.83
Atg4bQ8BGE6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4bQ8BGE6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4bQ8BGE6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4bQ8BGE6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atg4bQ8BGE6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.22■□□□□ 0.83
Atg4bQ8BGE6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.22■□□□□ 0.83
Atg4bQ8BGE6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4bQ8BGE6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.22■□□□□ 0.83
Atg4bQ8BGE6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4bQ8BGE6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.22■□□□□ 0.83
Atg4bQ8BGE6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4bQ8BGE6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atg4bQ8BGE6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Atg4bQ8BGE6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atg4bQ8BGE6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atg4bQ8BGE6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atg4bQ8BGE6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.21■□□□□ 0.83
Atg4bQ8BGE6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atg4bQ8BGE6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Atg4bQ8BGE6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.2■□□□□ 0.82
Atg4bQ8BGE6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atg4bQ8BGE6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4bQ8BGE6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Atg4bQ8BGE6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.19■□□□□ 0.82
Atg4bQ8BGE6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4bQ8BGE6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4bQ8BGE6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4bQ8BGE6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4bQ8BGE6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4bQ8BGE6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atg4bQ8BGE6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Atg4bQ8BGE6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atg4bQ8BGE6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.18■□□□□ 0.82
Atg4bQ8BGE6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Atg4bQ8BGE6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atg4bQ8BGE6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atg4bQ8BGE6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.18■□□□□ 0.82
Atg4bQ8BGE6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Atg4bQ8BGE6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atg4bQ8BGE6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Atg4bQ8BGE6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Atg4bQ8BGE6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.17■□□□□ 0.82
Atg4bQ8BGE6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.17■□□□□ 0.82
Atg4bQ8BGE6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.17■□□□□ 0.82
Atg4bQ8BGE6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atg4bQ8BGE6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atg4bQ8BGE6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.17■□□□□ 0.82
Atg4bQ8BGE6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Atg4bQ8BGE6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Atg4bQ8BGE6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atg4bQ8BGE6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Atg4bQ8BGE6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atg4bQ8BGE6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atg4bQ8BGE6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Atg4bQ8BGE6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atg4bQ8BGE6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atg4bQ8BGE6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atg4bQ8BGE6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.14■□□□□ 0.81
Atg4bQ8BGE6 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.14■□□□□ 0.81
Atg4bQ8BGE6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atg4bQ8BGE6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atg4bQ8BGE6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Atg4bQ8BGE6 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.13■□□□□ 0.81
Atg4bQ8BGE6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.13■□□□□ 0.81
Atg4bQ8BGE6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atg4bQ8BGE6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Atg4bQ8BGE6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.13■□□□□ 0.81
Atg4bQ8BGE6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Atg4bQ8BGE6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Atg4bQ8BGE6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atg4bQ8BGE6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.13■□□□□ 0.81
Atg4bQ8BGE6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atg4bQ8BGE6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atg4bQ8BGE6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atg4bQ8BGE6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atg4bQ8BGE6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atg4bQ8BGE6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atg4bQ8BGE6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.12■□□□□ 0.81
Atg4bQ8BGE6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.12■□□□□ 0.81
Atg4bQ8BGE6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Atg4bQ8BGE6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Atg4bQ8BGE6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atg4bQ8BGE6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.11■□□□□ 0.81
Atg4bQ8BGE6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms