Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc116Q80X53 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc116Q80X53 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc116Q80X53 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc116Q80X53 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc116Q80X53 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc116Q80X53 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc116Q80X53 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc116Q80X53 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc116Q80X53 Gm7332-201ENSMUST00000118351 454 ntBASIC21.04■□□□□ 0.96
Ccdc116Q80X53 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc116Q80X53 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc116Q80X53 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc116Q80X53 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc116Q80X53 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc116Q80X53 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc116Q80X53 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc116Q80X53 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc116Q80X53 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc116Q80X53 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc116Q80X53 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ccdc116Q80X53 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc116Q80X53 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc116Q80X53 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc116Q80X53 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc116Q80X53 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
Ccdc116Q80X53 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc116Q80X53 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc116Q80X53 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Ccdc116Q80X53 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ccdc116Q80X53 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ccdc116Q80X53 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc116Q80X53 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc116Q80X53 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc116Q80X53 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc116Q80X53 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc116Q80X53 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc116Q80X53 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ccdc116Q80X53 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc116Q80X53 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ccdc116Q80X53 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21■□□□□ 0.95
Ccdc116Q80X53 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21■□□□□ 0.95
Ccdc116Q80X53 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc116Q80X53 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc116Q80X53 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc116Q80X53 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc116Q80X53 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.99■□□□□ 0.95
Ccdc116Q80X53 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc116Q80X53 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc116Q80X53 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc116Q80X53 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.99■□□□□ 0.95
Ccdc116Q80X53 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc116Q80X53 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc116Q80X53 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.99■□□□□ 0.95
Ccdc116Q80X53 Gm12366-201ENSMUST00000121722 873 ntBASIC20.99■□□□□ 0.95
Ccdc116Q80X53 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.99■□□□□ 0.95
Ccdc116Q80X53 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc116Q80X53 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.99■□□□□ 0.95
Ccdc116Q80X53 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.99■□□□□ 0.95
Ccdc116Q80X53 Gm5786-201ENSMUST00000085368 882 ntBASIC20.99■□□□□ 0.95
Ccdc116Q80X53 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc116Q80X53 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc116Q80X53 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.98■□□□□ 0.95
Ccdc116Q80X53 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc116Q80X53 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc116Q80X53 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc116Q80X53 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc116Q80X53 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc116Q80X53 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc116Q80X53 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc116Q80X53 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc116Q80X53 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc116Q80X53 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc116Q80X53 Mir6538-201ENSMUST00000183713 110 ntBASIC20.97■□□□□ 0.95
Ccdc116Q80X53 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc116Q80X53 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccdc116Q80X53 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.97■□□□□ 0.95
Ccdc116Q80X53 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc116Q80X53 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc116Q80X53 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc116Q80X53 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc116Q80X53 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.96■□□□□ 0.95
Ccdc116Q80X53 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc116Q80X53 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.95■□□□□ 0.94
Ccdc116Q80X53 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc116Q80X53 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
Ccdc116Q80X53 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.95■□□□□ 0.94
Ccdc116Q80X53 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc116Q80X53 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ccdc116Q80X53 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc116Q80X53 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc116Q80X53 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc116Q80X53 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc116Q80X53 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.94■□□□□ 0.94
Ccdc116Q80X53 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc116Q80X53 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc116Q80X53 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc116Q80X53 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc116Q80X53 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.93■□□□□ 0.94
Ccdc116Q80X53 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms