Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Gm40881-201ENSMUST00000223397 166 ntBASIC23.36■■□□□ 1.33
Sh3tc2Q80VA5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sh3tc2Q80VA5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sh3tc2Q80VA5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Sh3tc2Q80VA5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Sh3tc2Q80VA5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC23.35■■□□□ 1.33
Sh3tc2Q80VA5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sh3tc2Q80VA5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Sh3tc2Q80VA5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Sh3tc2Q80VA5 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sh3tc2Q80VA5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sh3tc2Q80VA5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.34■■□□□ 1.33
Sh3tc2Q80VA5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Sh3tc2Q80VA5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.34■■□□□ 1.33
Sh3tc2Q80VA5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.33■■□□□ 1.33
Sh3tc2Q80VA5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sh3tc2Q80VA5 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Sh3tc2Q80VA5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Sh3tc2Q80VA5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Sh3tc2Q80VA5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Sh3tc2Q80VA5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Sh3tc2Q80VA5 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sh3tc2Q80VA5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sh3tc2Q80VA5 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sh3tc2Q80VA5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sh3tc2Q80VA5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Sh3tc2Q80VA5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sh3tc2Q80VA5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sh3tc2Q80VA5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
Sh3tc2Q80VA5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sh3tc2Q80VA5 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sh3tc2Q80VA5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Sh3tc2Q80VA5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sh3tc2Q80VA5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sh3tc2Q80VA5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.3■■□□□ 1.32
Sh3tc2Q80VA5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.3■■□□□ 1.32
Sh3tc2Q80VA5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Sh3tc2Q80VA5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sh3tc2Q80VA5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Sh3tc2Q80VA5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.29■■□□□ 1.32
Sh3tc2Q80VA5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC23.29■■□□□ 1.32
Sh3tc2Q80VA5 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sh3tc2Q80VA5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Sh3tc2Q80VA5 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sh3tc2Q80VA5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Sh3tc2Q80VA5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sh3tc2Q80VA5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.28■■□□□ 1.32
Sh3tc2Q80VA5 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sh3tc2Q80VA5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sh3tc2Q80VA5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.28■■□□□ 1.32
Sh3tc2Q80VA5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.27■■□□□ 1.32
Sh3tc2Q80VA5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3tc2Q80VA5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.27■■□□□ 1.32
Sh3tc2Q80VA5 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.27■■□□□ 1.32
Sh3tc2Q80VA5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3tc2Q80VA5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3tc2Q80VA5 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3tc2Q80VA5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Sh3tc2Q80VA5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.26■■□□□ 1.31
Sh3tc2Q80VA5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3tc2Q80VA5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3tc2Q80VA5 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
Sh3tc2Q80VA5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC23.26■■□□□ 1.31
Sh3tc2Q80VA5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sh3tc2Q80VA5 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Sh3tc2Q80VA5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.25■■□□□ 1.31
Sh3tc2Q80VA5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sh3tc2Q80VA5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Sh3tc2Q80VA5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Sh3tc2Q80VA5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.25■■□□□ 1.31
Sh3tc2Q80VA5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Sh3tc2Q80VA5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sh3tc2Q80VA5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3tc2Q80VA5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Sh3tc2Q80VA5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Sh3tc2Q80VA5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3tc2Q80VA5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC23.24■■□□□ 1.31
Sh3tc2Q80VA5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC23.24■■□□□ 1.31
Sh3tc2Q80VA5 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.24■■□□□ 1.31
Sh3tc2Q80VA5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3tc2Q80VA5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3tc2Q80VA5 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3tc2Q80VA5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Sh3tc2Q80VA5 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sh3tc2Q80VA5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sh3tc2Q80VA5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Sh3tc2Q80VA5 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Sh3tc2Q80VA5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC23.22■■□□□ 1.31
Sh3tc2Q80VA5 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Sh3tc2Q80VA5 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sh3tc2Q80VA5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sh3tc2Q80VA5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Sh3tc2Q80VA5 Gm12922-201ENSMUST00000120626 809 ntBASIC23.21■■□□□ 1.31
Sh3tc2Q80VA5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC23.21■■□□□ 1.31
Sh3tc2Q80VA5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh3tc2Q80VA5 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh3tc2Q80VA5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh3tc2Q80VA5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh3tc2Q80VA5 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh3tc2Q80VA5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms