Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Scn10aQ6QIY3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Scn10aQ6QIY3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Scn10aQ6QIY3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Scn10aQ6QIY3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
Scn10aQ6QIY3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Scn10aQ6QIY3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Scn10aQ6QIY3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Scn10aQ6QIY3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Scn10aQ6QIY3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Scn10aQ6QIY3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Scn10aQ6QIY3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Scn10aQ6QIY3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Scn10aQ6QIY3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Scn10aQ6QIY3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC25.09■■□□□ 1.61
Scn10aQ6QIY3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Scn10aQ6QIY3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Scn10aQ6QIY3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Scn10aQ6QIY3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
Scn10aQ6QIY3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Scn10aQ6QIY3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Scn10aQ6QIY3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Scn10aQ6QIY3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Scn10aQ6QIY3 Gm42699-201ENSMUST00000198104 1657 ntBASIC25.07■■□□□ 1.6
Scn10aQ6QIY3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Scn10aQ6QIY3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC25.07■■□□□ 1.6
Scn10aQ6QIY3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Scn10aQ6QIY3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Scn10aQ6QIY3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Scn10aQ6QIY3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Scn10aQ6QIY3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC25.06■■□□□ 1.6
Scn10aQ6QIY3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Scn10aQ6QIY3 Gm5297-201ENSMUST00000198555 1171 ntBASIC25.05■■□□□ 1.6
Scn10aQ6QIY3 Gm10620-201ENSMUST00000098379 1332 ntBASIC25.05■■□□□ 1.6
Scn10aQ6QIY3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Scn10aQ6QIY3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Scn10aQ6QIY3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Scn10aQ6QIY3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Scn10aQ6QIY3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Scn10aQ6QIY3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Scn10aQ6QIY3 Slc35b2-207ENSMUST00000226086 850 ntBASIC25.04■■□□□ 1.6
Scn10aQ6QIY3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Scn10aQ6QIY3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
Scn10aQ6QIY3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC25.04■■□□□ 1.6
Scn10aQ6QIY3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Scn10aQ6QIY3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Scn10aQ6QIY3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Scn10aQ6QIY3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC25.03■■□□□ 1.6
Scn10aQ6QIY3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Scn10aQ6QIY3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scn10aQ6QIY3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scn10aQ6QIY3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scn10aQ6QIY3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scn10aQ6QIY3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Scn10aQ6QIY3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scn10aQ6QIY3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC25.02■■□□□ 1.6
Scn10aQ6QIY3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Scn10aQ6QIY3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
Scn10aQ6QIY3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Scn10aQ6QIY3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC25.01■■□□□ 1.59
Scn10aQ6QIY3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Scn10aQ6QIY3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC25■■□□□ 1.59
Scn10aQ6QIY3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC25■■□□□ 1.59
Scn10aQ6QIY3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC25■■□□□ 1.59
Scn10aQ6QIY3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Scn10aQ6QIY3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC25■■□□□ 1.59
Scn10aQ6QIY3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Scn10aQ6QIY3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Scn10aQ6QIY3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC24.99■■□□□ 1.59
Scn10aQ6QIY3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Scn10aQ6QIY3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Scn10aQ6QIY3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
Scn10aQ6QIY3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Scn10aQ6QIY3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC24.97■■□□□ 1.59
Scn10aQ6QIY3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC24.97■■□□□ 1.59
Scn10aQ6QIY3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Scn10aQ6QIY3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC24.97■■□□□ 1.59
Scn10aQ6QIY3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Scn10aQ6QIY3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Scn10aQ6QIY3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Scn10aQ6QIY3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Scn10aQ6QIY3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Scn10aQ6QIY3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Scn10aQ6QIY3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC24.96■■□□□ 1.59
Scn10aQ6QIY3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Scn10aQ6QIY3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
Scn10aQ6QIY3 Gm2011-201ENSMUST00000203124 1263 ntBASIC24.95■■□□□ 1.58
Scn10aQ6QIY3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Scn10aQ6QIY3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Scn10aQ6QIY3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Scn10aQ6QIY3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Scn10aQ6QIY3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC24.94■■□□□ 1.58
Scn10aQ6QIY3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Scn10aQ6QIY3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC24.93■■□□□ 1.58
Scn10aQ6QIY3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Scn10aQ6QIY3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Scn10aQ6QIY3 Gm18284-201ENSMUST00000172604 624 ntBASIC24.93■■□□□ 1.58
Scn10aQ6QIY3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Scn10aQ6QIY3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Scn10aQ6QIY3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms