Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Smarca1Q6PGB8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Smarca1Q6PGB8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Smarca1Q6PGB8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.95■■□□□ 1.42
Smarca1Q6PGB8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.94■■□□□ 1.42
Smarca1Q6PGB8 Gm43566-201ENSMUST00000196851 808 ntBASIC23.94■■□□□ 1.42
Smarca1Q6PGB8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Smarca1Q6PGB8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.94■■□□□ 1.42
Smarca1Q6PGB8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.94■■□□□ 1.42
Smarca1Q6PGB8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smarca1Q6PGB8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.93■■□□□ 1.42
Smarca1Q6PGB8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smarca1Q6PGB8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smarca1Q6PGB8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.93■■□□□ 1.42
Smarca1Q6PGB8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Smarca1Q6PGB8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smarca1Q6PGB8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smarca1Q6PGB8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.92■■□□□ 1.42
Smarca1Q6PGB8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smarca1Q6PGB8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smarca1Q6PGB8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Smarca1Q6PGB8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smarca1Q6PGB8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Smarca1Q6PGB8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Smarca1Q6PGB8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.91■■□□□ 1.42
Smarca1Q6PGB8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Smarca1Q6PGB8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Smarca1Q6PGB8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smarca1Q6PGB8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Smarca1Q6PGB8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smarca1Q6PGB8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Smarca1Q6PGB8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smarca1Q6PGB8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smarca1Q6PGB8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smarca1Q6PGB8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smarca1Q6PGB8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smarca1Q6PGB8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Smarca1Q6PGB8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Smarca1Q6PGB8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.89■■□□□ 1.41
Smarca1Q6PGB8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.89■■□□□ 1.41
Smarca1Q6PGB8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Smarca1Q6PGB8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Smarca1Q6PGB8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smarca1Q6PGB8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Smarca1Q6PGB8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smarca1Q6PGB8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smarca1Q6PGB8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smarca1Q6PGB8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smarca1Q6PGB8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Smarca1Q6PGB8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Smarca1Q6PGB8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Smarca1Q6PGB8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
Smarca1Q6PGB8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smarca1Q6PGB8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smarca1Q6PGB8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smarca1Q6PGB8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smarca1Q6PGB8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smarca1Q6PGB8 Gm13238-201ENSMUST00000117655 780 ntBASIC23.86■■□□□ 1.41
Smarca1Q6PGB8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
Smarca1Q6PGB8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smarca1Q6PGB8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smarca1Q6PGB8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smarca1Q6PGB8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC23.86■■□□□ 1.41
Smarca1Q6PGB8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Smarca1Q6PGB8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
Smarca1Q6PGB8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC23.85■■□□□ 1.41
Smarca1Q6PGB8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Smarca1Q6PGB8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smarca1Q6PGB8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Smarca1Q6PGB8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Smarca1Q6PGB8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Smarca1Q6PGB8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.84■■□□□ 1.41
Smarca1Q6PGB8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.84■■□□□ 1.41
Smarca1Q6PGB8 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.84■■□□□ 1.41
Smarca1Q6PGB8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Smarca1Q6PGB8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Smarca1Q6PGB8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Smarca1Q6PGB8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smarca1Q6PGB8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smarca1Q6PGB8 Gm15546-201ENSMUST00000122095 826 ntBASIC23.82■■□□□ 1.4
Smarca1Q6PGB8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.82■■□□□ 1.4
Smarca1Q6PGB8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Smarca1Q6PGB8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smarca1Q6PGB8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Smarca1Q6PGB8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
Smarca1Q6PGB8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Smarca1Q6PGB8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smarca1Q6PGB8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smarca1Q6PGB8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Smarca1Q6PGB8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.81■■□□□ 1.4
Smarca1Q6PGB8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smarca1Q6PGB8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Smarca1Q6PGB8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smarca1Q6PGB8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smarca1Q6PGB8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smarca1Q6PGB8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smarca1Q6PGB8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Smarca1Q6PGB8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smarca1Q6PGB8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.79■■□□□ 1.4
Smarca1Q6PGB8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.79■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms