Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Snrnp40Q6PE01 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Snrnp40Q6PE01 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Snrnp40Q6PE01 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Snrnp40Q6PE01 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Snrnp40Q6PE01 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Snrnp40Q6PE01 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Snrnp40Q6PE01 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Snrnp40Q6PE01 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Snrnp40Q6PE01 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Snrnp40Q6PE01 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.1■□□□□ 0.65
Snrnp40Q6PE01 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Snrnp40Q6PE01 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Snrnp40Q6PE01 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
Snrnp40Q6PE01 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.1■□□□□ 0.65
Snrnp40Q6PE01 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Snrnp40Q6PE01 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Snrnp40Q6PE01 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Snrnp40Q6PE01 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Snrnp40Q6PE01 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.09■□□□□ 0.65
Snrnp40Q6PE01 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Snrnp40Q6PE01 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Snrnp40Q6PE01 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Snrnp40Q6PE01 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.09■□□□□ 0.65
Snrnp40Q6PE01 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.09■□□□□ 0.65
Snrnp40Q6PE01 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Snrnp40Q6PE01 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Snrnp40Q6PE01 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Snrnp40Q6PE01 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Snrnp40Q6PE01 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Snrnp40Q6PE01 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Snrnp40Q6PE01 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Snrnp40Q6PE01 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Snrnp40Q6PE01 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Snrnp40Q6PE01 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Snrnp40Q6PE01 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Snrnp40Q6PE01 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Snrnp40Q6PE01 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Snrnp40Q6PE01 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Snrnp40Q6PE01 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.07■□□□□ 0.64
Snrnp40Q6PE01 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Snrnp40Q6PE01 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Snrnp40Q6PE01 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.06■□□□□ 0.64
Snrnp40Q6PE01 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Snrnp40Q6PE01 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Snrnp40Q6PE01 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.05■□□□□ 0.64
Snrnp40Q6PE01 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.05■□□□□ 0.64
Snrnp40Q6PE01 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Snrnp40Q6PE01 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Snrnp40Q6PE01 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Snrnp40Q6PE01 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.05■□□□□ 0.64
Snrnp40Q6PE01 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Snrnp40Q6PE01 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Snrnp40Q6PE01 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Snrnp40Q6PE01 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Snrnp40Q6PE01 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Snrnp40Q6PE01 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Snrnp40Q6PE01 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.04■□□□□ 0.64
Snrnp40Q6PE01 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Snrnp40Q6PE01 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Snrnp40Q6PE01 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Snrnp40Q6PE01 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Snrnp40Q6PE01 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Snrnp40Q6PE01 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Snrnp40Q6PE01 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Snrnp40Q6PE01 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Snrnp40Q6PE01 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.02■□□□□ 0.64
Snrnp40Q6PE01 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Snrnp40Q6PE01 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Snrnp40Q6PE01 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Snrnp40Q6PE01 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.02■□□□□ 0.64
Snrnp40Q6PE01 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Snrnp40Q6PE01 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Snrnp40Q6PE01 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.01■□□□□ 0.63
Snrnp40Q6PE01 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Snrnp40Q6PE01 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Snrnp40Q6PE01 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Snrnp40Q6PE01 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.01■□□□□ 0.63
Snrnp40Q6PE01 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.01■□□□□ 0.63
Snrnp40Q6PE01 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.01■□□□□ 0.63
Snrnp40Q6PE01 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Snrnp40Q6PE01 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19■□□□□ 0.63
Snrnp40Q6PE01 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Snrnp40Q6PE01 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Snrnp40Q6PE01 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19■□□□□ 0.63
Snrnp40Q6PE01 Gm28731-201ENSMUST00000185564 1569 ntBASIC19■□□□□ 0.63
Snrnp40Q6PE01 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Snrnp40Q6PE01 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Snrnp40Q6PE01 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Snrnp40Q6PE01 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Snrnp40Q6PE01 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.98■□□□□ 0.63
Snrnp40Q6PE01 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.98■□□□□ 0.63
Snrnp40Q6PE01 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snrnp40Q6PE01 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snrnp40Q6PE01 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snrnp40Q6PE01 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Snrnp40Q6PE01 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.97■□□□□ 0.63
Snrnp40Q6PE01 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Snrnp40Q6PE01 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Snrnp40Q6PE01 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms