Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Cpsf6Q6NVF9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf6Q6NVF9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf6Q6NVF9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.76■□□□□ 0.91
Cpsf6Q6NVF9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf6Q6NVF9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cpsf6Q6NVF9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf6Q6NVF9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cpsf6Q6NVF9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf6Q6NVF9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf6Q6NVF9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf6Q6NVF9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf6Q6NVF9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Cpsf6Q6NVF9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cpsf6Q6NVF9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Gm7332-201ENSMUST00000118351 454 ntBASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cpsf6Q6NVF9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Mir6538-201ENSMUST00000183713 110 ntBASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cpsf6Q6NVF9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cpsf6Q6NVF9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf6Q6NVF9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf6Q6NVF9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.72■□□□□ 0.91
Cpsf6Q6NVF9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf6Q6NVF9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cpsf6Q6NVF9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cpsf6Q6NVF9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Cpsf6Q6NVF9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf6Q6NVF9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf6Q6NVF9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf6Q6NVF9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.71■□□□□ 0.91
Cpsf6Q6NVF9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf6Q6NVF9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf6Q6NVF9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.71■□□□□ 0.91
Cpsf6Q6NVF9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cpsf6Q6NVF9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cpsf6Q6NVF9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.69■□□□□ 0.9
Cpsf6Q6NVF9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf6Q6NVF9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf6Q6NVF9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.69■□□□□ 0.9
Cpsf6Q6NVF9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf6Q6NVF9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf6Q6NVF9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cpsf6Q6NVF9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf6Q6NVF9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.68■□□□□ 0.9
Cpsf6Q6NVF9 Gm12366-201ENSMUST00000121722 873 ntBASIC20.68■□□□□ 0.9
Cpsf6Q6NVF9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.68■□□□□ 0.9
Cpsf6Q6NVF9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.68■□□□□ 0.9
Cpsf6Q6NVF9 Gm5786-201ENSMUST00000085368 882 ntBASIC20.68■□□□□ 0.9
Cpsf6Q6NVF9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cpsf6Q6NVF9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cpsf6Q6NVF9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf6Q6NVF9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf6Q6NVF9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf6Q6NVF9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf6Q6NVF9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf6Q6NVF9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf6Q6NVF9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf6Q6NVF9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cpsf6Q6NVF9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
Cpsf6Q6NVF9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf6Q6NVF9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf6Q6NVF9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cpsf6Q6NVF9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf6Q6NVF9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms