Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.26■□□□□ 0.19
Zfp248Q640N4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Zfp248Q640N4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zfp248Q640N4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zfp248Q640N4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.26■□□□□ 0.19
Zfp248Q640N4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Zfp248Q640N4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zfp248Q640N4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zfp248Q640N4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zfp248Q640N4 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.26■□□□□ 0.19
Zfp248Q640N4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Zfp248Q640N4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.25■□□□□ 0.19
Zfp248Q640N4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Zfp248Q640N4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Zfp248Q640N4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Zfp248Q640N4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Zfp248Q640N4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Zfp248Q640N4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Zfp248Q640N4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.24■□□□□ 0.19
Zfp248Q640N4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zfp248Q640N4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zfp248Q640N4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.24■□□□□ 0.19
Zfp248Q640N4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Zfp248Q640N4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zfp248Q640N4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Zfp248Q640N4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Zfp248Q640N4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.24■□□□□ 0.19
Zfp248Q640N4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zfp248Q640N4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zfp248Q640N4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zfp248Q640N4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Zfp248Q640N4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Zfp248Q640N4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zfp248Q640N4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Zfp248Q640N4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zfp248Q640N4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Zfp248Q640N4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zfp248Q640N4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Zfp248Q640N4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Zfp248Q640N4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.23■□□□□ 0.19
Zfp248Q640N4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Zfp248Q640N4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Zfp248Q640N4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Zfp248Q640N4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zfp248Q640N4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Zfp248Q640N4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.22■□□□□ 0.19
Zfp248Q640N4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zfp248Q640N4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zfp248Q640N4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Zfp248Q640N4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Zfp248Q640N4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zfp248Q640N4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zfp248Q640N4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zfp248Q640N4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zfp248Q640N4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zfp248Q640N4 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.21■□□□□ 0.19
Zfp248Q640N4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zfp248Q640N4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zfp248Q640N4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zfp248Q640N4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Zfp248Q640N4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zfp248Q640N4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Zfp248Q640N4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zfp248Q640N4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Zfp248Q640N4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Zfp248Q640N4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Zfp248Q640N4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Zfp248Q640N4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.2■□□□□ 0.18
Zfp248Q640N4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zfp248Q640N4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zfp248Q640N4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zfp248Q640N4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.2■□□□□ 0.18
Zfp248Q640N4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zfp248Q640N4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zfp248Q640N4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Zfp248Q640N4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Zfp248Q640N4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Zfp248Q640N4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zfp248Q640N4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zfp248Q640N4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.19■□□□□ 0.18
Zfp248Q640N4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Zfp248Q640N4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zfp248Q640N4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zfp248Q640N4 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.19■□□□□ 0.18
Zfp248Q640N4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Zfp248Q640N4 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Zfp248Q640N4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Zfp248Q640N4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Zfp248Q640N4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.19■□□□□ 0.18
Zfp248Q640N4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zfp248Q640N4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Zfp248Q640N4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zfp248Q640N4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Zfp248Q640N4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zfp248Q640N4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Zfp248Q640N4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Zfp248Q640N4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.18■□□□□ 0.18
Zfp248Q640N4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zfp248Q640N4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Zfp248Q640N4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms