Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Scn9aQ62205 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Scn9aQ62205 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC26.03■■□□□ 1.76
Scn9aQ62205 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Scn9aQ62205 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Scn9aQ62205 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.02■■□□□ 1.76
Scn9aQ62205 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.02■■□□□ 1.76
Scn9aQ62205 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Scn9aQ62205 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Scn9aQ62205 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Scn9aQ62205 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.01■■□□□ 1.75
Scn9aQ62205 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Scn9aQ62205 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Scn9aQ62205 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Scn9aQ62205 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Scn9aQ62205 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
Scn9aQ62205 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Scn9aQ62205 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC26■■□□□ 1.75
Scn9aQ62205 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Scn9aQ62205 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Scn9aQ62205 Gm18284-201ENSMUST00000172604 624 ntBASIC25.99■■□□□ 1.75
Scn9aQ62205 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC25.99■■□□□ 1.75
Scn9aQ62205 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Scn9aQ62205 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Scn9aQ62205 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC25.99■■□□□ 1.75
Scn9aQ62205 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
Scn9aQ62205 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Scn9aQ62205 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Scn9aQ62205 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC25.97■■□□□ 1.75
Scn9aQ62205 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Scn9aQ62205 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Scn9aQ62205 Gm8093-201ENSMUST00000128935 1892 ntBASIC25.97■■□□□ 1.75
Scn9aQ62205 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC25.96■■□□□ 1.75
Scn9aQ62205 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC25.96■■□□□ 1.75
Scn9aQ62205 Flvcr1-202ENSMUST00000191946 1216 ntBASIC25.96■■□□□ 1.75
Scn9aQ62205 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
Scn9aQ62205 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Scn9aQ62205 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Scn9aQ62205 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Scn9aQ62205 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.75
Scn9aQ62205 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Scn9aQ62205 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Scn9aQ62205 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Scn9aQ62205 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Scn9aQ62205 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Scn9aQ62205 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Scn9aQ62205 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
Scn9aQ62205 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC25.95■■□□□ 1.74
Scn9aQ62205 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Scn9aQ62205 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Scn9aQ62205 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Scn9aQ62205 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Scn9aQ62205 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.94■■□□□ 1.74
Scn9aQ62205 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Scn9aQ62205 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC25.93■■□□□ 1.74
Scn9aQ62205 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC25.92■■□□□ 1.74
Scn9aQ62205 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Scn9aQ62205 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Scn9aQ62205 Gm8495-201ENSMUST00000188740 694 ntBASIC25.92■■□□□ 1.74
Scn9aQ62205 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Scn9aQ62205 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Scn9aQ62205 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Scn9aQ62205 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Scn9aQ62205 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Scn9aQ62205 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC25.91■■□□□ 1.74
Scn9aQ62205 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Scn9aQ62205 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC25.91■■□□□ 1.74
Scn9aQ62205 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC25.91■■□□□ 1.74
Scn9aQ62205 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Scn9aQ62205 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Scn9aQ62205 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Scn9aQ62205 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Scn9aQ62205 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Scn9aQ62205 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Scn9aQ62205 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Scn9aQ62205 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC25.89■■□□□ 1.73
Scn9aQ62205 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Scn9aQ62205 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Scn9aQ62205 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Scn9aQ62205 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC25.88■■□□□ 1.73
Scn9aQ62205 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Scn9aQ62205 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Scn9aQ62205 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Scn9aQ62205 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Scn9aQ62205 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC25.87■■□□□ 1.73
Scn9aQ62205 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Scn9aQ62205 Gm28731-201ENSMUST00000185564 1569 ntBASIC25.87■■□□□ 1.73
Scn9aQ62205 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Scn9aQ62205 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Scn9aQ62205 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Scn9aQ62205 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Scn9aQ62205 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
Scn9aQ62205 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC25.86■■□□□ 1.73
Scn9aQ62205 Gm2011-201ENSMUST00000203124 1263 ntBASIC25.86■■□□□ 1.73
Scn9aQ62205 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Scn9aQ62205 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Scn9aQ62205 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Scn9aQ62205 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Scn9aQ62205 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Scn9aQ62205 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms