Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vsx2Q61412 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vsx2Q61412 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vsx2Q61412 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vsx2Q61412 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vsx2Q61412 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vsx2Q61412 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vsx2Q61412 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vsx2Q61412 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vsx2Q61412 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Vsx2Q61412 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.78■□□□□ 0.92
Vsx2Q61412 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vsx2Q61412 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vsx2Q61412 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Vsx2Q61412 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Vsx2Q61412 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.78■□□□□ 0.92
Vsx2Q61412 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.78■□□□□ 0.92
Vsx2Q61412 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vsx2Q61412 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vsx2Q61412 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vsx2Q61412 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vsx2Q61412 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vsx2Q61412 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Vsx2Q61412 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Vsx2Q61412 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.92
Vsx2Q61412 Gm5921-201ENSMUST00000075898 882 ntBASIC20.77■□□□□ 0.92
Vsx2Q61412 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vsx2Q61412 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Vsx2Q61412 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vsx2Q61412 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Vsx2Q61412 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vsx2Q61412 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vsx2Q61412 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vsx2Q61412 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Vsx2Q61412 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vsx2Q61412 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vsx2Q61412 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vsx2Q61412 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vsx2Q61412 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vsx2Q61412 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vsx2Q61412 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vsx2Q61412 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Vsx2Q61412 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vsx2Q61412 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vsx2Q61412 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Vsx2Q61412 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.73■□□□□ 0.91
Vsx2Q61412 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vsx2Q61412 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vsx2Q61412 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Vsx2Q61412 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vsx2Q61412 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vsx2Q61412 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vsx2Q61412 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vsx2Q61412 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Vsx2Q61412 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.72■□□□□ 0.91
Vsx2Q61412 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.72■□□□□ 0.91
Vsx2Q61412 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vsx2Q61412 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vsx2Q61412 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vsx2Q61412 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vsx2Q61412 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vsx2Q61412 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.71■□□□□ 0.91
Vsx2Q61412 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vsx2Q61412 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Vsx2Q61412 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.71■□□□□ 0.91
Vsx2Q61412 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vsx2Q61412 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.7■□□□□ 0.9
Vsx2Q61412 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.7■□□□□ 0.9
Vsx2Q61412 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.7■□□□□ 0.9
Vsx2Q61412 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vsx2Q61412 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.69■□□□□ 0.9
Vsx2Q61412 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vsx2Q61412 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vsx2Q61412 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vsx2Q61412 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.69■□□□□ 0.9
Vsx2Q61412 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vsx2Q61412 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vsx2Q61412 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.69■□□□□ 0.9
Vsx2Q61412 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vsx2Q61412 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.69■□□□□ 0.9
Vsx2Q61412 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Vsx2Q61412 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vsx2Q61412 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vsx2Q61412 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vsx2Q61412 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vsx2Q61412 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vsx2Q61412 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vsx2Q61412 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vsx2Q61412 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.68■□□□□ 0.9
Vsx2Q61412 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.68■□□□□ 0.9
Vsx2Q61412 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.68■□□□□ 0.9
Vsx2Q61412 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Vsx2Q61412 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vsx2Q61412 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vsx2Q61412 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Vsx2Q61412 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.68■□□□□ 0.9
Vsx2Q61412 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.68■□□□□ 0.9
Vsx2Q61412 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vsx2Q61412 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vsx2Q61412 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms