Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.76■■□□□ 1.07
Sdf4Q61112 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Sdf4Q61112 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sdf4Q61112 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sdf4Q61112 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sdf4Q61112 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sdf4Q61112 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Sdf4Q61112 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sdf4Q61112 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sdf4Q61112 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Sdf4Q61112 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sdf4Q61112 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sdf4Q61112 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sdf4Q61112 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sdf4Q61112 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sdf4Q61112 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sdf4Q61112 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sdf4Q61112 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.74■■□□□ 1.07
Sdf4Q61112 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sdf4Q61112 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sdf4Q61112 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Sdf4Q61112 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Sdf4Q61112 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.73■■□□□ 1.07
Sdf4Q61112 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sdf4Q61112 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sdf4Q61112 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.72■■□□□ 1.07
Sdf4Q61112 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Sdf4Q61112 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sdf4Q61112 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sdf4Q61112 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sdf4Q61112 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Sdf4Q61112 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Sdf4Q61112 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sdf4Q61112 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Sdf4Q61112 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Sdf4Q61112 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.7■■□□□ 1.06
Sdf4Q61112 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sdf4Q61112 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sdf4Q61112 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sdf4Q61112 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sdf4Q61112 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sdf4Q61112 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Sdf4Q61112 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sdf4Q61112 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sdf4Q61112 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sdf4Q61112 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sdf4Q61112 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Sdf4Q61112 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sdf4Q61112 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sdf4Q61112 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sdf4Q61112 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Sdf4Q61112 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.67■■□□□ 1.06
Sdf4Q61112 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.67■■□□□ 1.06
Sdf4Q61112 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Sdf4Q61112 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sdf4Q61112 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.67■■□□□ 1.06
Sdf4Q61112 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.67■■□□□ 1.06
Sdf4Q61112 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.66■■□□□ 1.06
Sdf4Q61112 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sdf4Q61112 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sdf4Q61112 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sdf4Q61112 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sdf4Q61112 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Sdf4Q61112 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sdf4Q61112 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sdf4Q61112 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sdf4Q61112 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sdf4Q61112 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.65■■□□□ 1.06
Sdf4Q61112 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sdf4Q61112 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sdf4Q61112 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.64■■□□□ 1.06
Sdf4Q61112 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sdf4Q61112 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sdf4Q61112 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
Sdf4Q61112 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sdf4Q61112 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sdf4Q61112 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sdf4Q61112 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Sdf4Q61112 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sdf4Q61112 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sdf4Q61112 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sdf4Q61112 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sdf4Q61112 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sdf4Q61112 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Sdf4Q61112 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.63■■□□□ 1.05
Sdf4Q61112 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.63■■□□□ 1.05
Sdf4Q61112 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.63■■□□□ 1.05
Sdf4Q61112 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sdf4Q61112 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sdf4Q61112 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Sdf4Q61112 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Sdf4Q61112 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sdf4Q61112 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sdf4Q61112 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sdf4Q61112 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.63■■□□□ 1.05
Sdf4Q61112 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sdf4Q61112 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sdf4Q61112 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sdf4Q61112 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sdf4Q61112 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 139.2 ms