Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ClpbQ60649 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ClpbQ60649 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ClpbQ60649 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ClpbQ60649 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ClpbQ60649 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ClpbQ60649 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ClpbQ60649 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ClpbQ60649 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.51■□□□□ 0.87
ClpbQ60649 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ClpbQ60649 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ClpbQ60649 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ClpbQ60649 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
ClpbQ60649 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ClpbQ60649 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.49■□□□□ 0.87
ClpbQ60649 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ClpbQ60649 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ClpbQ60649 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.49■□□□□ 0.87
ClpbQ60649 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ClpbQ60649 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ClpbQ60649 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ClpbQ60649 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ClpbQ60649 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.48■□□□□ 0.87
ClpbQ60649 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ClpbQ60649 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ClpbQ60649 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ClpbQ60649 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ClpbQ60649 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ClpbQ60649 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.48■□□□□ 0.87
ClpbQ60649 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.47■□□□□ 0.87
ClpbQ60649 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ClpbQ60649 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ClpbQ60649 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ClpbQ60649 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.46■□□□□ 0.87
ClpbQ60649 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.46■□□□□ 0.87
ClpbQ60649 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.46■□□□□ 0.87
ClpbQ60649 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ClpbQ60649 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.46■□□□□ 0.87
ClpbQ60649 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
ClpbQ60649 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ClpbQ60649 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ClpbQ60649 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ClpbQ60649 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.45■□□□□ 0.86
ClpbQ60649 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ClpbQ60649 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ClpbQ60649 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ClpbQ60649 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ClpbQ60649 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ClpbQ60649 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.44■□□□□ 0.86
ClpbQ60649 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ClpbQ60649 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.44■□□□□ 0.86
ClpbQ60649 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ClpbQ60649 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ClpbQ60649 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
ClpbQ60649 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ClpbQ60649 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.43■□□□□ 0.86
ClpbQ60649 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ClpbQ60649 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ClpbQ60649 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.43■□□□□ 0.86
ClpbQ60649 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ClpbQ60649 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ClpbQ60649 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.43■□□□□ 0.86
ClpbQ60649 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ClpbQ60649 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ClpbQ60649 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ClpbQ60649 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ClpbQ60649 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ClpbQ60649 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.42■□□□□ 0.86
ClpbQ60649 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ClpbQ60649 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.42■□□□□ 0.86
ClpbQ60649 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
ClpbQ60649 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ClpbQ60649 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ClpbQ60649 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ClpbQ60649 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ClpbQ60649 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ClpbQ60649 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ClpbQ60649 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ClpbQ60649 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ClpbQ60649 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
ClpbQ60649 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.41■□□□□ 0.86
ClpbQ60649 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.41■□□□□ 0.86
ClpbQ60649 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ClpbQ60649 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ClpbQ60649 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.4■□□□□ 0.86
ClpbQ60649 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
ClpbQ60649 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.4■□□□□ 0.86
ClpbQ60649 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.4■□□□□ 0.86
ClpbQ60649 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.4■□□□□ 0.86
ClpbQ60649 Gm45444-201ENSMUST00000211394 898 ntBASIC20.4■□□□□ 0.86
ClpbQ60649 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ClpbQ60649 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ClpbQ60649 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ClpbQ60649 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.39■□□□□ 0.86
ClpbQ60649 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
ClpbQ60649 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
ClpbQ60649 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ClpbQ60649 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ClpbQ60649 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ClpbQ60649 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms