Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.07■□□□□ 0.48
Trav6d-4Q5R1I0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav6d-4Q5R1I0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.07■□□□□ 0.48
Trav6d-4Q5R1I0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6d-4Q5R1I0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav6d-4Q5R1I0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6d-4Q5R1I0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6d-4Q5R1I0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6d-4Q5R1I0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6d-4Q5R1I0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6d-4Q5R1I0 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.06■□□□□ 0.48
Trav6d-4Q5R1I0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6d-4Q5R1I0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trav6d-4Q5R1I0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6d-4Q5R1I0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6d-4Q5R1I0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6d-4Q5R1I0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6d-4Q5R1I0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6d-4Q5R1I0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6d-4Q5R1I0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav6d-4Q5R1I0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6d-4Q5R1I0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6d-4Q5R1I0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6d-4Q5R1I0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6d-4Q5R1I0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6d-4Q5R1I0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6d-4Q5R1I0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6d-4Q5R1I0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav6d-4Q5R1I0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trav6d-4Q5R1I0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6d-4Q5R1I0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6d-4Q5R1I0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Trav6d-4Q5R1I0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6d-4Q5R1I0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6d-4Q5R1I0 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.02■□□□□ 0.48
Trav6d-4Q5R1I0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6d-4Q5R1I0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6d-4Q5R1I0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6d-4Q5R1I0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Trav6d-4Q5R1I0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav6d-4Q5R1I0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav6d-4Q5R1I0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6d-4Q5R1I0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6d-4Q5R1I0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6d-4Q5R1I0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6d-4Q5R1I0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6d-4Q5R1I0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trav6d-4Q5R1I0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6d-4Q5R1I0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6d-4Q5R1I0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6d-4Q5R1I0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.01■□□□□ 0.47
Trav6d-4Q5R1I0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6d-4Q5R1I0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6d-4Q5R1I0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6d-4Q5R1I0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6d-4Q5R1I0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav6d-4Q5R1I0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav6d-4Q5R1I0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6d-4Q5R1I0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trav6d-4Q5R1I0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trav6d-4Q5R1I0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6d-4Q5R1I0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6d-4Q5R1I0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6d-4Q5R1I0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Trav6d-4Q5R1I0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.99■□□□□ 0.47
Trav6d-4Q5R1I0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6d-4Q5R1I0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6d-4Q5R1I0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6d-4Q5R1I0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6d-4Q5R1I0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6d-4Q5R1I0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.98■□□□□ 0.47
Trav6d-4Q5R1I0 Rps24-207ENSMUST00000224568 714 ntBASIC17.98■□□□□ 0.47
Trav6d-4Q5R1I0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6d-4Q5R1I0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6d-4Q5R1I0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6d-4Q5R1I0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6d-4Q5R1I0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6d-4Q5R1I0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6d-4Q5R1I0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Trav6d-4Q5R1I0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6d-4Q5R1I0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6d-4Q5R1I0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trav6d-4Q5R1I0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6d-4Q5R1I0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6d-4Q5R1I0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6d-4Q5R1I0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6d-4Q5R1I0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6d-4Q5R1I0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.96■□□□□ 0.47
Trav6d-4Q5R1I0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6d-4Q5R1I0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6d-4Q5R1I0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6d-4Q5R1I0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.96■□□□□ 0.47
Trav6d-4Q5R1I0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trav6d-4Q5R1I0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trav6d-4Q5R1I0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6d-4Q5R1I0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav6d-4Q5R1I0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Trav6d-4Q5R1I0 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.95■□□□□ 0.46
Trav6d-4Q5R1I0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6d-4Q5R1I0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms