Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.96■■□□□ 1.11
Rnf43Q5NCP0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rnf43Q5NCP0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rnf43Q5NCP0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf43Q5NCP0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf43Q5NCP0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf43Q5NCP0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Rnf43Q5NCP0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf43Q5NCP0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.95■■□□□ 1.1
Rnf43Q5NCP0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf43Q5NCP0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Rnf43Q5NCP0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf43Q5NCP0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf43Q5NCP0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.94■■□□□ 1.1
Rnf43Q5NCP0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.94■■□□□ 1.1
Rnf43Q5NCP0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf43Q5NCP0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rnf43Q5NCP0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rnf43Q5NCP0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rnf43Q5NCP0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf43Q5NCP0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf43Q5NCP0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf43Q5NCP0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf43Q5NCP0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf43Q5NCP0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.92■■□□□ 1.1
Rnf43Q5NCP0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf43Q5NCP0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf43Q5NCP0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Rnf43Q5NCP0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf43Q5NCP0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf43Q5NCP0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf43Q5NCP0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf43Q5NCP0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf43Q5NCP0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf43Q5NCP0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf43Q5NCP0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.9■■□□□ 1.1
Rnf43Q5NCP0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf43Q5NCP0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Rnf43Q5NCP0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf43Q5NCP0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf43Q5NCP0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.89■■□□□ 1.1
Rnf43Q5NCP0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rnf43Q5NCP0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.89■■□□□ 1.09
Rnf43Q5NCP0 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.89■■□□□ 1.09
Rnf43Q5NCP0 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.88■■□□□ 1.09
Rnf43Q5NCP0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf43Q5NCP0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf43Q5NCP0 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.88■■□□□ 1.09
Rnf43Q5NCP0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf43Q5NCP0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf43Q5NCP0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf43Q5NCP0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Rnf43Q5NCP0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.87■■□□□ 1.09
Rnf43Q5NCP0 Gm12821-201ENSMUST00000120022 600 ntBASIC21.87■■□□□ 1.09
Rnf43Q5NCP0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.87■■□□□ 1.09
Rnf43Q5NCP0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf43Q5NCP0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf43Q5NCP0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf43Q5NCP0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf43Q5NCP0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.86■■□□□ 1.09
Rnf43Q5NCP0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
Rnf43Q5NCP0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf43Q5NCP0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf43Q5NCP0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf43Q5NCP0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf43Q5NCP0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf43Q5NCP0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf43Q5NCP0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf43Q5NCP0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.85■■□□□ 1.09
Rnf43Q5NCP0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.85■■□□□ 1.09
Rnf43Q5NCP0 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.85■■□□□ 1.09
Rnf43Q5NCP0 Serp2-204ENSMUST00000228055 705 ntBASIC21.85■■□□□ 1.09
Rnf43Q5NCP0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf43Q5NCP0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf43Q5NCP0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.84■■□□□ 1.09
Rnf43Q5NCP0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.84■■□□□ 1.09
Rnf43Q5NCP0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf43Q5NCP0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf43Q5NCP0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf43Q5NCP0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf43Q5NCP0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf43Q5NCP0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.83■■□□□ 1.09
Rnf43Q5NCP0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Rnf43Q5NCP0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rnf43Q5NCP0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rnf43Q5NCP0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rnf43Q5NCP0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf43Q5NCP0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf43Q5NCP0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf43Q5NCP0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf43Q5NCP0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf43Q5NCP0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf43Q5NCP0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf43Q5NCP0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf43Q5NCP0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.81■■□□□ 1.08
Rnf43Q5NCP0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.81■■□□□ 1.08
Rnf43Q5NCP0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf43Q5NCP0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf43Q5NCP0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.79■■□□□ 1.08
Rnf43Q5NCP0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms