Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC25.02■■□□□ 1.6
Rc3h1Q4VGL6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rc3h1Q4VGL6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rc3h1Q4VGL6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rc3h1Q4VGL6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rc3h1Q4VGL6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC25.02■■□□□ 1.6
Rc3h1Q4VGL6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rc3h1Q4VGL6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC25.02■■□□□ 1.6
Rc3h1Q4VGL6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rc3h1Q4VGL6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
Rc3h1Q4VGL6 Etf1-202ENSMUST00000180351 108 ntBASIC25.01■■□□□ 1.59
Rc3h1Q4VGL6 Gm5131-201ENSMUST00000212776 1238 ntBASIC25.01■■□□□ 1.59
Rc3h1Q4VGL6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Rc3h1Q4VGL6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rc3h1Q4VGL6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Rc3h1Q4VGL6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC25■■□□□ 1.59
Rc3h1Q4VGL6 Gm11847-201ENSMUST00000125165 1119 ntBASIC25■■□□□ 1.59
Rc3h1Q4VGL6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC25■■□□□ 1.59
Rc3h1Q4VGL6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC25■■□□□ 1.59
Rc3h1Q4VGL6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC25■■□□□ 1.59
Rc3h1Q4VGL6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Rc3h1Q4VGL6 Gm8093-201ENSMUST00000128935 1892 ntBASIC25■■□□□ 1.59
Rc3h1Q4VGL6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rc3h1Q4VGL6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
Rc3h1Q4VGL6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
Rc3h1Q4VGL6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rc3h1Q4VGL6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rc3h1Q4VGL6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rc3h1Q4VGL6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
Rc3h1Q4VGL6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Rc3h1Q4VGL6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rc3h1Q4VGL6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rc3h1Q4VGL6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Rc3h1Q4VGL6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rc3h1Q4VGL6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC24.98■■□□□ 1.59
Rc3h1Q4VGL6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rc3h1Q4VGL6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.98■■□□□ 1.59
Rc3h1Q4VGL6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rc3h1Q4VGL6 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Rc3h1Q4VGL6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.97■■□□□ 1.59
Rc3h1Q4VGL6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rc3h1Q4VGL6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rc3h1Q4VGL6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Rc3h1Q4VGL6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Rc3h1Q4VGL6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
Rc3h1Q4VGL6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.59
Rc3h1Q4VGL6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.95■■□□□ 1.58
Rc3h1Q4VGL6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rc3h1Q4VGL6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rc3h1Q4VGL6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Rc3h1Q4VGL6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Rc3h1Q4VGL6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rc3h1Q4VGL6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rc3h1Q4VGL6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Rc3h1Q4VGL6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Rc3h1Q4VGL6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC24.94■■□□□ 1.58
Rc3h1Q4VGL6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rc3h1Q4VGL6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rc3h1Q4VGL6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Rc3h1Q4VGL6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rc3h1Q4VGL6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rc3h1Q4VGL6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rc3h1Q4VGL6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Rc3h1Q4VGL6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.93■■□□□ 1.58
Rc3h1Q4VGL6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC24.93■■□□□ 1.58
Rc3h1Q4VGL6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
Rc3h1Q4VGL6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Rc3h1Q4VGL6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rc3h1Q4VGL6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rc3h1Q4VGL6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC24.92■■□□□ 1.58
Rc3h1Q4VGL6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rc3h1Q4VGL6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Rc3h1Q4VGL6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC24.92■■□□□ 1.58
Rc3h1Q4VGL6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rc3h1Q4VGL6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rc3h1Q4VGL6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rc3h1Q4VGL6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
Rc3h1Q4VGL6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Rc3h1Q4VGL6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC24.91■■□□□ 1.58
Rc3h1Q4VGL6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC24.91■■□□□ 1.58
Rc3h1Q4VGL6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Rc3h1Q4VGL6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rc3h1Q4VGL6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rc3h1Q4VGL6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.9■■□□□ 1.58
Rc3h1Q4VGL6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rc3h1Q4VGL6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Rc3h1Q4VGL6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Rc3h1Q4VGL6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Rc3h1Q4VGL6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.89■■□□□ 1.58
Rc3h1Q4VGL6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Rc3h1Q4VGL6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Rc3h1Q4VGL6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Rc3h1Q4VGL6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rc3h1Q4VGL6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rc3h1Q4VGL6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rc3h1Q4VGL6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rc3h1Q4VGL6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Rc3h1Q4VGL6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.88■■□□□ 1.57
Rc3h1Q4VGL6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Rc3h1Q4VGL6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms