Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Herc2Q4U2R1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Herc2Q4U2R1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Herc2Q4U2R1 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.42□□□□□ -0.26
Herc2Q4U2R1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Herc2Q4U2R1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Herc2Q4U2R1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Herc2Q4U2R1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Herc2Q4U2R1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Herc2Q4U2R1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Herc2Q4U2R1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.41□□□□□ -0.26
Herc2Q4U2R1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Herc2Q4U2R1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Herc2Q4U2R1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Herc2Q4U2R1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Herc2Q4U2R1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Herc2Q4U2R1 Gm42642-201ENSMUST00000200683 355 ntBASIC13.41□□□□□ -0.26
Herc2Q4U2R1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Herc2Q4U2R1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.4□□□□□ -0.26
Herc2Q4U2R1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Herc2Q4U2R1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Herc2Q4U2R1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.4□□□□□ -0.26
Herc2Q4U2R1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Herc2Q4U2R1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Herc2Q4U2R1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Herc2Q4U2R1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.39□□□□□ -0.27
Herc2Q4U2R1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Herc2Q4U2R1 Gm10493-201ENSMUST00000097270 612 ntBASIC13.39□□□□□ -0.27
Herc2Q4U2R1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Herc2Q4U2R1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Herc2Q4U2R1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Herc2Q4U2R1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Herc2Q4U2R1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Herc2Q4U2R1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Herc2Q4U2R1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Herc2Q4U2R1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Herc2Q4U2R1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Herc2Q4U2R1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Herc2Q4U2R1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Herc2Q4U2R1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Herc2Q4U2R1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC13.38□□□□□ -0.27
Herc2Q4U2R1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Herc2Q4U2R1 Gm10252-201ENSMUST00000209541 832 ntBASIC13.38□□□□□ -0.27
Herc2Q4U2R1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Herc2Q4U2R1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Herc2Q4U2R1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Herc2Q4U2R1 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.37□□□□□ -0.27
Herc2Q4U2R1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Herc2Q4U2R1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Herc2Q4U2R1 Mir7075-201ENSMUST00000184187 82 ntBASIC13.37□□□□□ -0.27
Herc2Q4U2R1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Herc2Q4U2R1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Herc2Q4U2R1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Herc2Q4U2R1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Herc2Q4U2R1 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.35□□□□□ -0.27
Herc2Q4U2R1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Herc2Q4U2R1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.35□□□□□ -0.27
Herc2Q4U2R1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Herc2Q4U2R1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Herc2Q4U2R1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Herc2Q4U2R1 Gm44949-201ENSMUST00000206423 1450 ntBASIC13.35□□□□□ -0.27
Herc2Q4U2R1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Herc2Q4U2R1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Herc2Q4U2R1 Gm28536-201ENSMUST00000190971 1317 ntBASIC13.34□□□□□ -0.27
Herc2Q4U2R1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Herc2Q4U2R1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Herc2Q4U2R1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.34□□□□□ -0.27
Herc2Q4U2R1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.34□□□□□ -0.27
Herc2Q4U2R1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Herc2Q4U2R1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC13.34□□□□□ -0.27
Herc2Q4U2R1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Herc2Q4U2R1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Herc2Q4U2R1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.33□□□□□ -0.28
Herc2Q4U2R1 Gm10399-202ENSMUST00000202768 748 ntBASIC13.33□□□□□ -0.28
Herc2Q4U2R1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC13.33□□□□□ -0.28
Herc2Q4U2R1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.33□□□□□ -0.28
Herc2Q4U2R1 Gm43137-201ENSMUST00000198052 594 ntBASIC13.33□□□□□ -0.28
Herc2Q4U2R1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Herc2Q4U2R1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Herc2Q4U2R1 Nespas-201ENSMUST00000143738 1083 ntBASIC13.32□□□□□ -0.28
Herc2Q4U2R1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Herc2Q4U2R1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC13.32□□□□□ -0.28
Herc2Q4U2R1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Herc2Q4U2R1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.32□□□□□ -0.28
Herc2Q4U2R1 Gm8493-201ENSMUST00000196881 489 ntBASIC13.32□□□□□ -0.28
Herc2Q4U2R1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Herc2Q4U2R1 Gm7977-201ENSMUST00000193787 748 ntBASIC13.32□□□□□ -0.28
Herc2Q4U2R1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.32□□□□□ -0.28
Herc2Q4U2R1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Herc2Q4U2R1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Herc2Q4U2R1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Herc2Q4U2R1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Herc2Q4U2R1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Herc2Q4U2R1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.31□□□□□ -0.28
Herc2Q4U2R1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Herc2Q4U2R1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Herc2Q4U2R1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC13.31□□□□□ -0.28
Herc2Q4U2R1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Herc2Q4U2R1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Herc2Q4U2R1 Gm8093-201ENSMUST00000128935 1892 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 118.5 ms