Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC24.9■■□□□ 1.58
Cdkl5Q3UTQ8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Cdkl5Q3UTQ8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Cdkl5Q3UTQ8 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.89■■□□□ 1.58
Cdkl5Q3UTQ8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Cdkl5Q3UTQ8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC24.89■■□□□ 1.57
Cdkl5Q3UTQ8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
Cdkl5Q3UTQ8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Cdkl5Q3UTQ8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Cdkl5Q3UTQ8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC24.88■■□□□ 1.57
Cdkl5Q3UTQ8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cdkl5Q3UTQ8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Cdkl5Q3UTQ8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Cdkl5Q3UTQ8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Cdkl5Q3UTQ8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC24.88■■□□□ 1.57
Cdkl5Q3UTQ8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Cdkl5Q3UTQ8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Cdkl5Q3UTQ8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cdkl5Q3UTQ8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cdkl5Q3UTQ8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Cdkl5Q3UTQ8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC24.87■■□□□ 1.57
Cdkl5Q3UTQ8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Cdkl5Q3UTQ8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Cdkl5Q3UTQ8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Cdkl5Q3UTQ8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Cdkl5Q3UTQ8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
Cdkl5Q3UTQ8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Cdkl5Q3UTQ8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
Cdkl5Q3UTQ8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC24.86■■□□□ 1.57
Cdkl5Q3UTQ8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Cdkl5Q3UTQ8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Cdkl5Q3UTQ8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Cdkl5Q3UTQ8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Cdkl5Q3UTQ8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC24.86■■□□□ 1.57
Cdkl5Q3UTQ8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Cdkl5Q3UTQ8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Cdkl5Q3UTQ8 Gm26766-202ENSMUST00000227544 2347 ntBASIC24.85■■□□□ 1.57
Cdkl5Q3UTQ8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.85■■□□□ 1.57
Cdkl5Q3UTQ8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Cdkl5Q3UTQ8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Cdkl5Q3UTQ8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Cdkl5Q3UTQ8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Cdkl5Q3UTQ8 Nsd1-206ENSMUST00000224918 1001 ntBASIC24.84■■□□□ 1.57
Cdkl5Q3UTQ8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Cdkl5Q3UTQ8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Cdkl5Q3UTQ8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC24.83■■□□□ 1.57
Cdkl5Q3UTQ8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC24.83■■□□□ 1.57
Cdkl5Q3UTQ8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC24.83■■□□□ 1.56
Cdkl5Q3UTQ8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC24.83■■□□□ 1.56
Cdkl5Q3UTQ8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Cdkl5Q3UTQ8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Cdkl5Q3UTQ8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Cdkl5Q3UTQ8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Cdkl5Q3UTQ8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Cdkl5Q3UTQ8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Cdkl5Q3UTQ8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC24.81■■□□□ 1.56
Cdkl5Q3UTQ8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC24.81■■□□□ 1.56
Cdkl5Q3UTQ8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Cdkl5Q3UTQ8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
Cdkl5Q3UTQ8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Cdkl5Q3UTQ8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Cdkl5Q3UTQ8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Cdkl5Q3UTQ8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC24.8■■□□□ 1.56
Cdkl5Q3UTQ8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.56
Cdkl5Q3UTQ8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC24.79■■□□□ 1.56
Cdkl5Q3UTQ8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Cdkl5Q3UTQ8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Cdkl5Q3UTQ8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Cdkl5Q3UTQ8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Cdkl5Q3UTQ8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC24.79■■□□□ 1.56
Cdkl5Q3UTQ8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Cdkl5Q3UTQ8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
Cdkl5Q3UTQ8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Cdkl5Q3UTQ8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Cdkl5Q3UTQ8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Cdkl5Q3UTQ8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Cdkl5Q3UTQ8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cdkl5Q3UTQ8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cdkl5Q3UTQ8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Cdkl5Q3UTQ8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cdkl5Q3UTQ8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cdkl5Q3UTQ8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cdkl5Q3UTQ8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cdkl5Q3UTQ8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cdkl5Q3UTQ8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cdkl5Q3UTQ8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cdkl5Q3UTQ8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cdkl5Q3UTQ8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cdkl5Q3UTQ8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Cdkl5Q3UTQ8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.76■■□□□ 1.55
Cdkl5Q3UTQ8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Cdkl5Q3UTQ8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cdkl5Q3UTQ8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cdkl5Q3UTQ8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC24.75■■□□□ 1.55
Cdkl5Q3UTQ8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Cdkl5Q3UTQ8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC24.75■■□□□ 1.55
Cdkl5Q3UTQ8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Cdkl5Q3UTQ8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cdkl5Q3UTQ8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cdkl5Q3UTQ8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms