Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.86■■□□□ 1.09
Naf1Q3UMQ8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Naf1Q3UMQ8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.85■■□□□ 1.09
Naf1Q3UMQ8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.85■■□□□ 1.09
Naf1Q3UMQ8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.85■■□□□ 1.09
Naf1Q3UMQ8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Naf1Q3UMQ8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Naf1Q3UMQ8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Naf1Q3UMQ8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Naf1Q3UMQ8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Naf1Q3UMQ8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.84■■□□□ 1.09
Naf1Q3UMQ8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Naf1Q3UMQ8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Naf1Q3UMQ8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Naf1Q3UMQ8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Naf1Q3UMQ8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
Naf1Q3UMQ8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.83■■□□□ 1.09
Naf1Q3UMQ8 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.83■■□□□ 1.09
Naf1Q3UMQ8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.83■■□□□ 1.08
Naf1Q3UMQ8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Naf1Q3UMQ8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Naf1Q3UMQ8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Naf1Q3UMQ8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Naf1Q3UMQ8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Naf1Q3UMQ8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Naf1Q3UMQ8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Naf1Q3UMQ8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Naf1Q3UMQ8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Naf1Q3UMQ8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.81■■□□□ 1.08
Naf1Q3UMQ8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Naf1Q3UMQ8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Naf1Q3UMQ8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Naf1Q3UMQ8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.8■■□□□ 1.08
Naf1Q3UMQ8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.8■■□□□ 1.08
Naf1Q3UMQ8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.8■■□□□ 1.08
Naf1Q3UMQ8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Naf1Q3UMQ8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Naf1Q3UMQ8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.79■■□□□ 1.08
Naf1Q3UMQ8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Naf1Q3UMQ8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Naf1Q3UMQ8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Naf1Q3UMQ8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Naf1Q3UMQ8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Naf1Q3UMQ8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Naf1Q3UMQ8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Naf1Q3UMQ8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.78■■□□□ 1.08
Naf1Q3UMQ8 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.78■■□□□ 1.08
Naf1Q3UMQ8 Etf1-202ENSMUST00000180351 108 ntBASIC21.78■■□□□ 1.08
Naf1Q3UMQ8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Naf1Q3UMQ8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Naf1Q3UMQ8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
Naf1Q3UMQ8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Naf1Q3UMQ8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Naf1Q3UMQ8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Naf1Q3UMQ8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Naf1Q3UMQ8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Naf1Q3UMQ8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.77■■□□□ 1.08
Naf1Q3UMQ8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Naf1Q3UMQ8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Naf1Q3UMQ8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Naf1Q3UMQ8 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.76■■□□□ 1.07
Naf1Q3UMQ8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.76■■□□□ 1.07
Naf1Q3UMQ8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.76■■□□□ 1.07
Naf1Q3UMQ8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Naf1Q3UMQ8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Naf1Q3UMQ8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Naf1Q3UMQ8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Naf1Q3UMQ8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.75■■□□□ 1.07
Naf1Q3UMQ8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Naf1Q3UMQ8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.75■■□□□ 1.07
Naf1Q3UMQ8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Naf1Q3UMQ8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.74■■□□□ 1.07
Naf1Q3UMQ8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Naf1Q3UMQ8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.74■■□□□ 1.07
Naf1Q3UMQ8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.74■■□□□ 1.07
Naf1Q3UMQ8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Naf1Q3UMQ8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Naf1Q3UMQ8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.73■■□□□ 1.07
Naf1Q3UMQ8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Naf1Q3UMQ8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Naf1Q3UMQ8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Naf1Q3UMQ8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Naf1Q3UMQ8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.73■■□□□ 1.07
Naf1Q3UMQ8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Naf1Q3UMQ8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Naf1Q3UMQ8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Naf1Q3UMQ8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Naf1Q3UMQ8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Naf1Q3UMQ8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.72■■□□□ 1.07
Naf1Q3UMQ8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Naf1Q3UMQ8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Naf1Q3UMQ8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Naf1Q3UMQ8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Naf1Q3UMQ8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Naf1Q3UMQ8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Naf1Q3UMQ8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Naf1Q3UMQ8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Naf1Q3UMQ8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Naf1Q3UMQ8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.7■■□□□ 1.06
Naf1Q3UMQ8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms