Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Treml4Q3LRV9 Gm22238-201ENSMUST00000175222 88 ntBASIC20.14■□□□□ 0.81
Treml4Q3LRV9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.14■□□□□ 0.81
Treml4Q3LRV9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.14■□□□□ 0.81
Treml4Q3LRV9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Treml4Q3LRV9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Treml4Q3LRV9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Treml4Q3LRV9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Treml4Q3LRV9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Treml4Q3LRV9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Treml4Q3LRV9 Gm40881-201ENSMUST00000223397 166 ntBASIC20.13■□□□□ 0.81
Treml4Q3LRV9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Treml4Q3LRV9 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.13■□□□□ 0.81
Treml4Q3LRV9 Notumos-201ENSMUST00000151998 2659 ntBASIC20.13■□□□□ 0.81
Treml4Q3LRV9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Treml4Q3LRV9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Treml4Q3LRV9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Treml4Q3LRV9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Treml4Q3LRV9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.12■□□□□ 0.81
Treml4Q3LRV9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Treml4Q3LRV9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Treml4Q3LRV9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Treml4Q3LRV9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Treml4Q3LRV9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Treml4Q3LRV9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Treml4Q3LRV9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Treml4Q3LRV9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Treml4Q3LRV9 Gm12922-201ENSMUST00000120626 809 ntBASIC20.11■□□□□ 0.81
Treml4Q3LRV9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.11■□□□□ 0.81
Treml4Q3LRV9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.11■□□□□ 0.81
Treml4Q3LRV9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Treml4Q3LRV9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Treml4Q3LRV9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.1■□□□□ 0.81
Treml4Q3LRV9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Treml4Q3LRV9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.1■□□□□ 0.81
Treml4Q3LRV9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Treml4Q3LRV9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Treml4Q3LRV9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Treml4Q3LRV9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Treml4Q3LRV9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Treml4Q3LRV9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Treml4Q3LRV9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Treml4Q3LRV9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Treml4Q3LRV9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Treml4Q3LRV9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Treml4Q3LRV9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Treml4Q3LRV9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Treml4Q3LRV9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
Treml4Q3LRV9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.08■□□□□ 0.81
Treml4Q3LRV9 Serp2-204ENSMUST00000228055 705 ntBASIC20.08■□□□□ 0.81
Treml4Q3LRV9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Treml4Q3LRV9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Treml4Q3LRV9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.08■□□□□ 0.8
Treml4Q3LRV9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Treml4Q3LRV9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Treml4Q3LRV9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Treml4Q3LRV9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Treml4Q3LRV9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Treml4Q3LRV9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.07■□□□□ 0.8
Treml4Q3LRV9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.07■□□□□ 0.8
Treml4Q3LRV9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Treml4Q3LRV9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Treml4Q3LRV9 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.06■□□□□ 0.8
Treml4Q3LRV9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Treml4Q3LRV9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Treml4Q3LRV9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Treml4Q3LRV9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Treml4Q3LRV9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.06■□□□□ 0.8
Treml4Q3LRV9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Treml4Q3LRV9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Treml4Q3LRV9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Treml4Q3LRV9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Treml4Q3LRV9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Treml4Q3LRV9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Treml4Q3LRV9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Treml4Q3LRV9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Treml4Q3LRV9 Gm21956-201ENSMUST00000179946 522 ntBASIC20.05■□□□□ 0.8
Treml4Q3LRV9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Treml4Q3LRV9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Treml4Q3LRV9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Treml4Q3LRV9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Treml4Q3LRV9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Treml4Q3LRV9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Treml4Q3LRV9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Treml4Q3LRV9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Treml4Q3LRV9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Treml4Q3LRV9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Treml4Q3LRV9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Treml4Q3LRV9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.03■□□□□ 0.8
Treml4Q3LRV9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Treml4Q3LRV9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Treml4Q3LRV9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Treml4Q3LRV9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.03■□□□□ 0.8
Treml4Q3LRV9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Treml4Q3LRV9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.02■□□□□ 0.8
Treml4Q3LRV9 Gm12821-201ENSMUST00000120022 600 ntBASIC20.02■□□□□ 0.8
Treml4Q3LRV9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Treml4Q3LRV9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.02■□□□□ 0.8
Treml4Q3LRV9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Treml4Q3LRV9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms