Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptchd3Q0EEE2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptchd3Q0EEE2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptchd3Q0EEE2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptchd3Q0EEE2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ptchd3Q0EEE2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.58■□□□□ 0.89
Ptchd3Q0EEE2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ptchd3Q0EEE2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ptchd3Q0EEE2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ptchd3Q0EEE2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptchd3Q0EEE2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptchd3Q0EEE2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ptchd3Q0EEE2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptchd3Q0EEE2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptchd3Q0EEE2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptchd3Q0EEE2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptchd3Q0EEE2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Ptchd3Q0EEE2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptchd3Q0EEE2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Ptchd3Q0EEE2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ptchd3Q0EEE2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptchd3Q0EEE2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ptchd3Q0EEE2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptchd3Q0EEE2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptchd3Q0EEE2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptchd3Q0EEE2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptchd3Q0EEE2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptchd3Q0EEE2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.56■□□□□ 0.88
Ptchd3Q0EEE2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ptchd3Q0EEE2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.56■□□□□ 0.88
Ptchd3Q0EEE2 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.55■□□□□ 0.88
Ptchd3Q0EEE2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptchd3Q0EEE2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ptchd3Q0EEE2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptchd3Q0EEE2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.55■□□□□ 0.88
Ptchd3Q0EEE2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ptchd3Q0EEE2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptchd3Q0EEE2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptchd3Q0EEE2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ptchd3Q0EEE2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptchd3Q0EEE2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ptchd3Q0EEE2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ptchd3Q0EEE2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptchd3Q0EEE2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptchd3Q0EEE2 Notumos-201ENSMUST00000151998 2659 ntBASIC20.53■□□□□ 0.88
Ptchd3Q0EEE2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptchd3Q0EEE2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ptchd3Q0EEE2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.53■□□□□ 0.88
Ptchd3Q0EEE2 Scarna2-201ENSMUST00000157560 414 ntBASIC20.53■□□□□ 0.88
Ptchd3Q0EEE2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.53■□□□□ 0.88
Ptchd3Q0EEE2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptchd3Q0EEE2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ptchd3Q0EEE2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ptchd3Q0EEE2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.52■□□□□ 0.88
Ptchd3Q0EEE2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ptchd3Q0EEE2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.52■□□□□ 0.88
Ptchd3Q0EEE2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Ptchd3Q0EEE2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.52■□□□□ 0.87
Ptchd3Q0EEE2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptchd3Q0EEE2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptchd3Q0EEE2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ptchd3Q0EEE2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptchd3Q0EEE2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptchd3Q0EEE2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.5■□□□□ 0.87
Ptchd3Q0EEE2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptchd3Q0EEE2 Gm16437-201ENSMUST00000025669 507 ntBASIC20.5■□□□□ 0.87
Ptchd3Q0EEE2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptchd3Q0EEE2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ptchd3Q0EEE2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptchd3Q0EEE2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptchd3Q0EEE2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ptchd3Q0EEE2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptchd3Q0EEE2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptchd3Q0EEE2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptchd3Q0EEE2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptchd3Q0EEE2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptchd3Q0EEE2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.49■□□□□ 0.87
Ptchd3Q0EEE2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ptchd3Q0EEE2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptchd3Q0EEE2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ptchd3Q0EEE2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Ptchd3Q0EEE2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ptchd3Q0EEE2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Ptchd3Q0EEE2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ptchd3Q0EEE2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptchd3Q0EEE2 Gm22567-201ENSMUST00000175542 342 ntBASIC20.48■□□□□ 0.87
Ptchd3Q0EEE2 Gm9806-201ENSMUST00000051080 552 ntBASIC20.48■□□□□ 0.87
Ptchd3Q0EEE2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ptchd3Q0EEE2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ptchd3Q0EEE2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ptchd3Q0EEE2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptchd3Q0EEE2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptchd3Q0EEE2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ptchd3Q0EEE2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ptchd3Q0EEE2 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.47■□□□□ 0.87
Ptchd3Q0EEE2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.47■□□□□ 0.87
Ptchd3Q0EEE2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptchd3Q0EEE2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptchd3Q0EEE2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Ptchd3Q0EEE2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms